Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0077500 Rhododendron simsii HOM05D000007 ORTHO05D013648 1.7e-151 539.3 267 100.0
Rhsim06G0130000 Rhododendron simsii HOM05D000007 ORTHO05D013648 5.6e-110 401.4 293 72.7
vmacro22600 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 3.0e-47 193.0 306 44.4
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 1.8e-44 183.7 292 44.9
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 4.1e-44 182.6 288 42.7
vmacro22599 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 2.9e-42 176.4 275 43.6
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 3.6e-40 169.5 269 42.4
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 3.1e-36 156.4 278 42.4
Rhsim02G0239200 Rhododendron simsii HOM05D000007 ORTHO05D013648 3.4e-35 152.9 293 41.6
Rhsim05G0077300 Rhododendron simsii HOM05D000007 ORTHO05D013648 2.0e-30 137.1 271 38.4
Rhsim11G0032200 Rhododendron simsii HOM05D000007 ORTHO05D013648 1.3e-29 134.4 157 48.4
RhsimUnG0076700 Rhododendron simsii HOM05D000007 ORTHO05D013648 1.8e-28 130.6 271 36.9
Rhsim03G0245800 Rhododendron simsii HOM05D000007 ORTHO05D013648 3.6e-24 116.3 286 34.6
Actinidia38708 Actinidia chinensis HOM05D000007 ORTHO05D013648 3.0e-23 113.2 196 40.3
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 3.0e-15 86.7 278 29.1
MSTRG.3214 Avicennia marina HOM05D000007 ORTHO05D000039 1.2e-14 84.7 266 28.9
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 2.0e-14 84.0 279 29.7
Dinv11523 Davidia involucrata HOM05D000007 ORTHO05D000039 1.3e-13 81.3 277 31.8
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 1.3e-13 81.3 278 29.5
Dinv33763 Davidia involucrata HOM05D000001 ORTHO05D000003 1.7e-13 80.9 285 30.9
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.7e-13 79.7 271 29.5
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 4.8e-13 79.3 278 29.1
RhsimUnG0026700 Rhododendron simsii HOM05D000002 ORTHO05D013648 3.1e-12 76.6 188 34.0
Actinidia27875 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.0e-11 73.9 157 33.8
Dinv07686 Davidia involucrata HOM05D000007 ORTHO05D000039 1.0e-10 71.6 266 25.9
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 1.0e-10 71.6 265 28.7
SGA_v2.0_scaffold135G34779 Striga asiatica HOM05D000007 ORTHO05D000039 1.0e-10 71.6 277 28.5
Actinidia10577 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.7e-10 70.9 273 26.7
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 1.7e-10 70.9 250 27.6
CSS0003262 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 3.8e-10 69.7 269 26.8
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.5e-10 68.9 288 27.1
Sc10g0006140 Simmondsia chinensis HOM05D000007 ORTHO05D000039 8.5e-10 68.6 271 28.0
Ciclev10026927m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.5e-09 67.8 271 25.1
Actinidia27873 Actinidia chinensis HOM05D000007 ORTHO05D013648 3.2e-09 66.6 117 37.6
Dinv01035 Davidia involucrata HOM05D000007 ORTHO05D000039 3.2e-09 66.6 266 25.6
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 4.2e-09 66.2 278 28.1
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 9.4e-09 65.1 298 26.8
SalBow1G6928 Salvia bowleyana HOM05D000007 ORTHO05D000039 1.2e-08 64.7 162 30.9
Cfa006665 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.6e-08 64.3 284 27.8
Lj2A996T28 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-08 64.3 264 30.3
Actinidia29351 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.7e-08 63.5 256 25.0
SalBow1G7567 Salvia bowleyana HOM05D000007 ORTHO05D000039 2.7e-08 63.5 268 26.5
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 3.6e-08 63.2 275 24.7
MSTRG.14886 Avicennia marina HOM05D000007 ORTHO05D000039 4.7e-08 62.8 267 25.5
Lsat_1_v5_gn_8_141900 Lactuca sativa HOM05D000007 ORTHO05D000039 4.7e-08 62.8 270 29.6
Peaxi162Scf00290g00811 Petunia axillaris HOM05D016135 ORTHO05D016171 4.7e-08 62.8 251 25.5
Ah.15g098400 Amaranthus hybridus HOM05D000007 ORTHO05D000039 2.3e-07 60.5 258 26.0
CANSAT54G0074 Cannabis sativa HOM05D000007 ORTHO05D000039 2.3e-07 60.5 263 25.5
DCAR_007412 Daucus carota HOM05D000007 ORTHO05D000039 2.3e-07 60.5 254 25.2
SGA_v2.0_scaffold108G30901 Striga asiatica HOM05D005116 ORTHO05D005937 2.3e-07 60.5 253 24.1
EL10Ac9g23000 Beta vulgaris HOM05D000007 ORTHO05D000039 3.0e-07 60.1 279 25.1
Lj8C10T4 Lonicera japonica HOM05D000007 ORTHO05D000039 3.0e-07 60.1 279 28.7
Lj5C836T3 Lonicera japonica HOM05D000007 ORTHO05D000039 4.0e-07 59.7 294 25.5
Ah.15g097560 Amaranthus hybridus HOM05D000007 ORTHO05D000039 5.2e-07 59.3 270 26.7
Cfa000501 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.8e-07 58.9 253 26.9
TWI53G1885 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 8.8e-07 58.5 158 29.1
PSO724G1300 Papaver somniferum HOM05D000007 ORTHO05D000039 1.2e-06 58.2 277 28.2
EL10Ac9g22940 Beta vulgaris HOM05D000007 ORTHO05D000039 1.5e-06 57.8 279 24.4
TWI14G1098 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.5e-06 57.8 296 25.7
Cfa000453 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.0e-06 57.4 286 26.2
Cfa000455 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.0e-06 57.4 286 25.5
Cfa000498 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.0e-06 57.4 294 24.8
Ciclev10027518m.g Citrus clementina HOM05D000007 ORTHO05D000039 2.0e-06 57.4 254 24.4
Lj3C660T6 Lonicera japonica HOM05D000007 ORTHO05D000039 2.6e-06 57.0 294 24.8
QL03p021893 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-06 57.0 283 26.9
Cfa000454 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.4e-06 56.6 294 22.1
Gorai.011G276500 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.4e-06 56.6 286 24.8
Actinidia38771 Actinidia chinensis HOM05D000007 ORTHO05D000039 4.4e-06 56.2 158 30.4
Gohir.D10G240616 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.4e-06 56.2 283 25.4
Gohir.D10G241300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.4e-06 56.2 283 25.4
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 5.7e-06 55.8 279 26.9
Lj1C724G4 Lonicera japonica HOM05D000007 ORTHO05D000039 5.7e-06 55.8 265 25.3
QL03p020743 Quercus lobata HOM05D000007 ORTHO05D000039 5.7e-06 55.8 283 26.9
QL03p020817 Quercus lobata HOM05D000007 ORTHO05D000039 5.7e-06 55.8 283 26.9
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 7.5e-06 55.5 276 25.7
MELO3C009392.2 Cucumis melo HOM05D000007 ORTHO05D000039 9.8e-06 55.1 164 28.0


User provided reference genes

Program Settings