Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 2.1e-175 619.0 333 100.0
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 4.8e-135 485.0 333 79.0
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 7.6e-133 477.6 335 77.0
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 3.2e-131 472.2 349 70.5
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.3e-129 466.8 327 79.5
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 4.5e-125 451.8 333 74.8
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.6e-119 433.3 327 71.3
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 4.8e-119 431.8 352 67.6
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 5.9e-117 424.9 332 71.7
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 8.5e-116 421.0 337 69.4
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 4.2e-115 418.7 352 65.6
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 1.0e-113 414.1 330 69.7
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 2.0e-112 409.8 325 67.1
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 9.7e-112 407.5 330 70.0
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.7e-111 406.8 329 68.1
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 6.3e-111 404.8 329 70.2
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 8.2e-111 404.4 358 62.3
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 8.2e-111 404.4 329 66.9
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 4.1e-110 402.1 326 69.6
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 1.5e-109 400.2 333 69.4
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 4.5e-109 398.7 327 69.1
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 1.0e-108 397.5 324 67.6
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 1.7e-108 396.7 329 66.6
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 3.8e-108 395.6 320 68.4
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.4e-107 393.7 318 69.2
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 1.4e-107 393.7 323 68.1
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.4e-107 393.7 328 66.5
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 3.6e-106 389.0 325 66.8
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.0e-105 387.5 334 66.2
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 1.0e-105 387.5 324 63.6
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.4e-105 387.1 323 66.9
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 2.3e-105 386.3 327 67.6
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 2.3e-105 386.3 317 66.2
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 3.9e-105 385.6 330 66.1
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 3.9e-105 385.6 320 66.6
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.9e-105 385.6 323 67.8
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 3.9e-105 385.6 322 61.2
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 5.1e-105 385.2 326 67.8
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 6.7e-105 384.8 338 64.5
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 6.7e-105 384.8 334 65.9
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.1e-104 384.0 327 66.7
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.5e-104 383.6 334 65.6
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 2.6e-104 382.9 329 64.7
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 3.3e-104 382.5 331 65.3
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 1.3e-103 380.6 323 67.2
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.3e-103 380.6 325 64.9
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 2.2e-103 379.8 328 64.6
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 6.3e-103 378.3 328 61.3
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.4e-102 377.1 323 65.6
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.2e-101 374.0 332 64.5
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 5.9e-101 371.7 341 61.3
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 7.7e-101 371.3 328 63.7
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 1.0e-100 370.9 330 64.8
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 2.2e-100 369.8 332 63.3
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 2.2e-100 369.8 322 61.5
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 2.9e-100 369.4 329 66.3
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 6.5e-100 368.2 333 64.6
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 6.5e-100 368.2 328 63.1
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 8.5e-100 367.9 320 65.0
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 1.6e-98 363.6 318 65.1
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 4.7e-98 362.1 316 63.6
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 4.7e-98 362.1 325 63.4
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.4e-97 360.5 316 63.9
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 1.8e-97 360.1 316 63.6
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.8e-97 360.1 332 63.3
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.5e-96 357.1 314 64.3
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.6e-96 356.3 332 60.5
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 6.3e-95 351.7 325 62.5
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 8.2e-95 351.3 325 62.5
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 8.2e-95 351.3 325 62.5
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 2.4e-94 349.7 316 62.3
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 7.0e-94 348.2 325 62.5
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 9.1e-94 347.8 330 61.5
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 2.0e-93 346.7 321 62.3
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 4.5e-93 345.5 328 62.5
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 6.5e-92 341.7 317 61.2
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 8.5e-92 341.3 314 62.7
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 1.1e-91 340.9 325 60.6
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 3.2e-91 339.3 314 62.7
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 7.2e-91 338.2 336 58.9
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 8.8e-89 331.3 332 57.5
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.5e-88 330.5 333 58.0
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 3.4e-88 329.3 332 53.3
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 7.5e-88 328.2 327 59.0
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 8.3e-87 324.7 315 57.5
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 1.4e-86 323.9 324 55.9
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 7.0e-86 321.6 317 56.2
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 9.1e-86 321.2 288 63.5
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 3.2e-83 312.8 330 48.8
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 4.2e-83 312.4 281 65.8
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 2.7e-82 309.7 314 58.6
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 2.7e-82 309.7 314 58.6
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 2.3e-81 306.6 314 57.6
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 1.5e-80 303.9 171 81.9
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 2.0e-80 303.5 324 54.9
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 7.2e-75 285.0 310 56.5
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 4.4e-72 275.8 236 58.9
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.4e-70 270.0 206 60.2
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 7.0e-70 268.5 212 58.5
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 9.2e-70 268.1 327 52.3
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 1.6e-69 267.3 265 53.2
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.9e-69 265.4 205 60.0
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 3.9e-68 262.7 323 49.2
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.6e-67 258.8 227 55.5
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 1.2e-66 257.7 235 54.0
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.3e-63 247.7 214 56.1
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 2.9e-63 246.5 166 68.7
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 4.1e-62 242.7 166 68.1
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 6.6e-60 235.3 217 53.9
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 2.5e-59 233.4 317 47.0
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 1.3e-47 194.5 164 59.1
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.7e-47 193.0 184 54.9
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 4.9e-47 192.6 208 47.1
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 2.2e-39 167.2 253 36.4
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 2.9e-39 166.8 210 53.8
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 3.1e-33 146.7 112 63.4
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 6.9e-33 145.6 375 32.3
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 3.4e-32 143.3 332 33.7
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 6.4e-31 139.0 236 33.9
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.2e-30 136.7 117 60.7
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 3.3e-27 126.7 87 65.5
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 2.8e-26 123.6 83 74.7
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 8.1e-26 122.1 81 77.8
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 1.2e-24 118.2 253 41.5
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 4.9e-23 112.8 84 69.0
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 4.6e-21 106.3 70 65.7
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 3.2e-14 83.6 122 40.2
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 9.3e-14 82.0 48 79.2
PRCOL_00002257 Prasinoderma coloniale HOM05D005795 ORTHO05D007200 3.5e-13 80.1 356 31.2
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.1e-10 70.9 58 58.6
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 8.2e-10 68.9 56 62.5
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 8.2e-10 68.9 282 24.1
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.8e-09 67.8 44 77.3
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 1.8e-09 67.8 183 26.8
Rhsim05G0171500 Rhododendron simsii HOM05D005795 ORTHO05D007200 6.9e-09 65.9 45 71.1
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 4.5e-08 63.2 184 29.3
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 1.7e-07 61.2 182 25.3
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 6.5e-07 59.3 212 21.2
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 1.9e-06 57.8 185 28.1
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 3.2e-06 57.0 147 41.5
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 3.2e-06 57.0 94 30.9
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 4.2e-06 56.6 185 30.8
SGA_v2.0_scaffold44G16633 Striga asiatica HOM05D056423 ORTHO05D406573 4.2e-06 56.6 78 37.2


User provided reference genes

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