Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0072200 Rhododendron simsii HOM05D035665 ORTHO05D001207 3.5e-95 351.7 183 100.0
Rhsim03G0038200 Rhododendron simsii HOM05D001578 ORTHO05D001207 5.7e-13 78.6 87 49.4
Rhsim03G0038400 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.3e-12 77.4 74 54.1
Rhsim03G0038700 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.6e-12 77.0 74 54.1
Rhsim03G0038600 Rhododendron simsii HOM05D000036 ORTHO05D005472 3.7e-12 75.9 74 52.7
Rhsim02G0073200 Rhododendron simsii HOM05D035665 ORTHO05D001207 6.3e-12 75.1 72 52.8
vmacro15637 Vaccinium macrocarpon HOM05D000074 ORTHO05D001262 6.9e-11 71.6 108 50.0
Potri.010G209800 Populus trichocarpa HOM05D004113 ORTHO05D005233 4.5e-10 68.9 72 48.6
Sabra10G0162100 Salix brachista HOM05D004113 ORTHO05D005233 2.2e-09 66.6 85 43.5
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 2.2e-09 66.6 82 42.7
Rhsim13G0002900 Rhododendron simsii HOM05D001578 ORTHO05D001207 8.5e-09 64.7 87 44.8
TAR365G1026 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.1e-08 64.3 82 41.5
CSS0037733 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 2.5e-08 63.2 74 45.9
TAR365G0500 Trochodendron aralioides HOM05D001578 ORTHO05D001207 2.5e-08 63.2 82 40.2
Rhsim04G0241400 Rhododendron simsii HOM05D001578 ORTHO05D001207 7.2e-08 61.6 77 42.9
Actinidia21379 Actinidia chinensis HOM05D001578 ORTHO05D001207 1.6e-07 60.5 77 48.1
Cfa006332 Carpinus fangiana HOM05D001578 ORTHO05D001207 2.7e-07 59.7 60 51.7
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.7e-07 59.7 87 42.5
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 3.6e-07 59.3 72 45.8
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 3.6e-07 59.3 72 45.8
Thecc.01G317500 Theobroma cacao HOM05D001578 ORTHO05D001207 3.6e-07 59.3 113 32.7
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 4.6e-07 58.9 73 43.8
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 6.1e-07 58.5 87 41.4
Gohir.A01G035300 Gossypium hirsutum HOM05D001578 ORTHO05D001207 6.1e-07 58.5 74 41.9
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 6.1e-07 58.5 72 37.5
Ciclev10003542m.g Citrus clementina HOM05D001578 ORTHO05D001207 7.9e-07 58.2 87 42.5
Gohir.D01G023568 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.8e-06 57.0 74 40.5
Gorai.002G031200 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.8e-06 57.0 74 40.5
Rhsim05G0218600 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.8e-06 57.0 72 47.2
Ciclev10013964m.g Citrus clementina HOM05D001578 ORTHO05D001207 3.0e-06 56.2 73 43.8
Manes.03G045700 Manihot esculenta HOM05D004113 ORTHO05D005233 3.0e-06 56.2 102 36.3
Nitab4.5_0004809g0010 Nicotiana tabacum HOM05D001578 ORTHO05D001207 3.9e-06 55.8 72 40.3
Psat0s2818g0040 Pisum sativum HOM05D001578 ORTHO05D001207 3.9e-06 55.8 72 44.4
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 5.1e-06 55.5 70 41.4
Manes.10G035700 Manihot esculenta HOM05D004113 ORTHO05D005233 5.1e-06 55.5 72 40.3
Lalb_Chr07g0181931 Lupinus albus HOM05D001578 ORTHO05D001207 8.8e-06 54.7 72 41.7
Lalb_Chr20g0117771 Lupinus albus HOM05D001578 ORTHO05D001207 8.8e-06 54.7 85 40.0
PGSC0003DMG400035074 Solanum tuberosum HOM05D023375 ORTHO05D005233 8.8e-06 54.7 71 39.4


User provided reference genes

Program Settings