Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 0.0e+00 1270.0 651 100.0
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 1.2e-211 740.3 615 71.7
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 2.4e-162 576.6 580 58.8
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 7.1e-143 511.9 568 53.9
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 3.9e-141 506.1 565 54.5
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 9.6e-140 501.5 567 52.2
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 1.5e-121 441.0 557 47.0
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 8.8e-117 425.2 559 45.6
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 3.1e-114 416.8 566 43.8
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 5.9e-113 412.5 598 43.1
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 2.9e-112 410.2 570 44.0
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 3.8e-112 409.8 568 43.3
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.4e-111 407.9 568 43.0
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 2.1e-110 404.1 565 45.1
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.8e-109 401.0 568 42.8
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 3.0e-109 400.2 562 44.0
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 8.8e-109 398.7 559 43.5
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 2.4e-106 390.6 598 41.8
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 1.6e-105 387.9 571 41.5
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 2.0e-105 387.5 526 43.5
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 1.3e-104 384.8 566 41.7
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 3.8e-104 383.3 563 41.0
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 1.9e-103 380.9 589 40.2
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 3.0e-101 373.6 568 42.4
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 7.5e-100 369.0 573 41.0
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 7.5e-100 369.0 558 41.9
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 3.7e-99 366.7 550 40.0
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 4.1e-98 363.2 563 41.7
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 4.1e-98 363.2 567 41.1
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 2.2e-96 357.5 580 43.4
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 2.9e-96 357.1 567 38.4
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 1.1e-95 355.1 564 38.7
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 3.2e-95 353.6 567 40.9
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 3.2e-95 353.6 561 39.4
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 6.1e-94 349.4 558 38.9
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 1.5e-92 344.7 519 40.1
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 2.6e-92 344.0 556 39.4
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 4.4e-92 343.2 569 37.8
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 2.8e-91 340.5 552 39.9
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 4.1e-90 336.7 620 37.9
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 2.0e-89 334.3 563 37.1
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 2.7e-89 334.0 575 37.0
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 5.9e-89 332.8 558 38.2
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 7.7e-89 332.4 573 37.5
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 1.0e-88 332.0 567 37.9
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 1.0e-88 332.0 556 39.2
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.0e-88 332.0 585 38.1
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.3e-88 331.6 585 38.1
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 5.0e-88 329.7 508 40.2
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 4.2e-87 326.6 409 49.1
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 2.1e-86 324.3 551 38.8
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 4.7e-86 323.2 551 37.9
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 8.0e-86 322.4 551 37.9
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 3.0e-85 320.5 409 48.7
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 1.5e-84 318.2 510 39.0
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 2.6e-84 317.4 570 36.0
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 9.8e-84 315.5 572 35.5
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 1.3e-83 315.1 570 35.4
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 3.7e-83 313.5 570 36.0
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 3.7e-83 313.5 562 36.5
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 8.3e-83 312.4 578 36.0
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 7.0e-82 309.3 573 36.3
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 5.9e-81 306.2 615 35.8
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 1.7e-80 304.7 577 34.8
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 8.6e-80 302.4 577 35.0
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 8.9e-77 292.4 525 35.6
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 1.2e-76 292.0 498 37.3
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 9.8e-76 288.9 279 55.6
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 1.9e-74 284.6 527 34.5
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 4.1e-74 283.5 557 33.9
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 9.2e-74 282.3 257 59.9
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 2.3e-72 277.7 565 33.3
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 3.3e-71 273.9 573 33.9
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 2.1e-70 271.2 572 35.3
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 2.1e-70 271.2 545 32.7
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 2.8e-70 270.8 527 34.5
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 6.2e-70 269.6 537 35.9
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 8.9e-69 265.8 556 33.1
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 1.4e-66 258.5 526 33.3
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 4.1e-66 256.9 516 35.5
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 1.6e-62 245.0 497 33.2
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 5.2e-61 240.0 543 32.0
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 1.2e-60 238.8 558 31.2
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 5.8e-60 236.5 548 31.4
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 1.7e-59 235.0 552 29.9
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 2.4e-58 231.1 560 30.2
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 5.4e-58 229.9 523 31.9
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 7.1e-58 229.6 560 29.8
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 2.1e-57 228.0 265 49.1
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 2.7e-57 227.6 236 54.7
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 5.1e-56 223.4 534 31.1
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 5.1e-56 223.4 268 47.0
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 4.4e-52 210.3 516 29.7
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 6.0e-49 199.9 292 41.4
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 7.8e-49 199.5 257 50.6
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 1.3e-48 198.7 274 42.7
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 5.1e-48 196.8 273 42.5
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 3.3e-47 194.1 256 44.9
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 3.3e-47 194.1 552 28.4
Oeu025032.1 Olea europaea HOM05D006138 ORTHO05D007778 1.6e-46 191.8 140 69.3
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 1.9e-42 178.3 256 43.4
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 6.0e-41 173.3 315 35.6
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 1.3e-40 172.2 524 27.1
Duzib268G1255 Durio zibethinus HOM05D006138 ORTHO05D007778 1.9e-39 168.3 153 56.9
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 8.1e-38 162.9 558 26.0
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 1.8e-37 161.8 132 59.8
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.8e-32 145.2 252 38.1
TPR.G24162 Trifolium pratense HOM05D006138 ORTHO05D007778 4.3e-31 140.6 384 26.6
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 7.4e-31 139.8 241 38.2
RcHm_v2.0_Chr4g0414071 Rosa chinensis HOM05D006138 ORTHO05D007778 9.3e-26 122.9 127 55.1
Actinidia16488 Actinidia chinensis HOM05D006138 ORTHO05D007778 7.9e-25 119.8 85 74.1
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 5.1e-24 117.1 148 45.3
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 5.1e-24 117.1 159 46.5
Duzib268G0147 Durio zibethinus HOM05D006138 ORTHO05D007778 8.7e-24 116.3 121 50.4
Zm00001eb085830 Zea mays HOM05D006138 ORTHO05D007778 1.3e-16 92.4 562 23.3
Phvul.001G135400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 6.7e-16 90.1 107 48.6
FAN17G0457 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.1e-15 89.4 176 35.2
Hund29337 Selenicereus undatus HOM05D006138 ORTHO05D007778 3.3e-15 87.8 68 60.3
Hund29338 Selenicereus undatus HOM05D006138 ORTHO05D007778 3.3e-15 87.8 68 60.3
RcHm_v2.0_Chr4g0419401 Rosa chinensis HOM05D006138 ORTHO05D007778 1.6e-09 68.9 102 40.2
CSS0037607 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 5.1e-08 63.9 52 69.2


User provided reference genes

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