Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0055700 Rhododendron simsii HOM05D000007 ORTHO05D000017 2.1e-88 328.9 158 100.0
vmacro15517 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.1e-15 87.4 144 39.6
Rhsim02G0055500 Rhododendron simsii HOM05D000007 ORTHO05D000017 5.4e-12 75.1 75 56.0
Rhsim05G0173700 Rhododendron simsii HOM05D000007 ORTHO05D000017 5.4e-12 75.1 135 40.0
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 1.2e-11 73.9 120 39.2
Rhsim02G0055300 Rhododendron simsii HOM05D000007 ORTHO05D000017 3.5e-11 72.4 99 41.4
Rhsim02G0055400 Rhododendron simsii HOM05D004543 ORTHO05D006042 7.8e-11 71.2 132 35.6
RhsimUnG0147300 Rhododendron simsii HOM05D000007 ORTHO05D000017 7.8e-11 71.2 133 39.8
Gohir.D09G195100 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.2e-08 61.6 135 34.8
Rhsim05G0174400 Rhododendron simsii HOM05D000007 ORTHO05D000017 1.1e-07 60.8 47 61.7
Gorai.006G218500 Gossypium raimondii HOM05D000007 ORTHO05D000017 1.8e-07 60.1 135 34.1
Medtr3g058470 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-07 60.1 106 34.9
Rhsim05G0173800 Rhododendron simsii HOM05D000007 ORTHO05D000017 1.8e-07 60.1 127 34.6
vmacro19993 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 2.3e-07 59.7 54 55.6
DCAR_026597 Daucus carota HOM05D000007 ORTHO05D000017 4.0e-07 58.9 146 33.6
Gohir.A09G200800 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.8e-07 58.2 143 32.9
Gohir.A09G200901 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.0e-06 56.6 97 39.2
Lj2P928T12 Lonicera japonica HOM05D000007 ORTHO05D000017 3.4e-06 55.8 140 31.4
Lj2P943T5 Lonicera japonica HOM05D000007 ORTHO05D000017 3.4e-06 55.8 140 31.4
COL.COLO4_21619 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.8e-06 55.1 57 50.9
Manes.15G021100 Manihot esculenta HOM05D000007 ORTHO05D000017 7.6e-06 54.7 93 35.5
vmacro15519 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 7.6e-06 54.7 155 32.3


User provided reference genes

Program Settings