Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 0.0e+00 1885.5 1031 100.0
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 0.0e+00 1286.2 1063 70.8
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 0.0e+00 1283.9 1063 70.7
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 0.0e+00 1271.9 800 91.1
Rhsim10G0070400 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-157 559.7 594 65.2
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-112 410.2 1027 34.4
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-112 410.2 1066 33.7
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.9e-112 409.5 1066 33.7
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.7e-111 406.0 1066 33.5
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-99 368.2 790 36.5
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.1e-88 330.1 550 41.5
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-84 317.8 991 34.3
Rhsim01G0036600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.8e-82 310.8 426 51.4
Rhsim06G0095000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.0e-79 301.2 511 44.2
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.2e-77 293.1 1108 28.2
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-75 288.5 912 30.4
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.5e-74 283.1 1106 27.7
Rhsim08G0172300 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.4e-73 279.6 229 69.4
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 8.0e-72 276.6 361 45.7
Rhsim08G0172400 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.2e-71 273.9 319 54.2
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-68 265.4 554 37.4
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.5e-67 260.8 694 32.0
Rhsim05G0021100 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.8e-62 243.0 127 97.6
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.8e-51 206.8 217 48.8
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.5e-49 201.8 554 31.9
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-48 199.1 822 30.7
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 5.2e-47 194.1 399 37.1
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.4e-38 164.9 301 37.5
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.4e-38 164.9 248 40.3
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 1.7e-37 162.5 304 33.2
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.7e-37 161.4 358 34.1
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-36 159.8 315 30.2
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-36 159.8 297 36.0
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 2.4e-36 158.7 297 29.0
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-36 158.3 300 35.7
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.2e-36 156.8 300 35.7
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.2e-36 156.8 300 30.7
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-34 153.3 341 28.4
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.7e-34 152.5 303 32.0
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.0e-34 151.8 300 31.7
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.6e-32 144.8 264 30.7
RhsimUnG0058200 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.3e-31 142.1 540 29.8
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.5e-30 139.4 237 33.8
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.6e-30 137.1 300 29.0
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.6e-30 137.1 300 29.0
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 4.9e-29 134.4 175 38.9
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.4e-28 132.1 285 28.8
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.1e-28 131.3 360 26.1
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-27 129.4 300 28.3
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-27 127.9 285 28.1
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.0e-26 125.2 394 26.9
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.1e-26 124.4 454 24.9
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.1e-26 124.4 456 24.8
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.1e-26 124.4 257 27.6
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 5.1e-26 124.4 291 27.8
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-25 123.2 366 26.0
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.3e-25 121.7 195 36.4
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.6e-25 120.9 323 28.5
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 9.6e-25 120.2 448 27.0
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.7e-24 117.9 376 26.9
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.2e-24 117.5 210 34.3
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.4e-23 115.5 316 27.5
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.0e-22 112.5 316 26.9
Rhsim08G0155200 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.8e-21 108.2 268 29.9
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.9e-21 107.8 314 27.1
RhsimUnG0191000 Rhododendron simsii HOM05D007376 ORTHO05D338621 3.2e-20 105.1 456 30.5
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 4.6e-19 101.3 255 29.0
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.1e-18 97.8 243 25.5
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.1e-17 96.7 265 26.0
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.9e-17 95.9 392 24.5
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 1.9e-17 95.9 264 24.2
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.5e-17 95.5 341 25.5
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.5e-17 95.5 341 25.5
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.3e-17 94.7 62 74.2
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 5.6e-17 94.4 271 26.2
Rhsim13G0135500 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-17 94.0 242 26.9
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 9.6e-17 93.6 375 26.1
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.3e-16 93.2 223 29.1
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-16 93.2 130 36.9
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.3e-16 93.2 284 26.1
Rhsim12G0112900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-16 92.8 76 64.5
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 2.1e-16 92.4 174 31.6
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 2.8e-16 92.0 316 23.4
Rhsim01G0083900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-15 90.1 162 39.5
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 1.4e-15 89.7 274 26.3
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.4e-15 89.7 328 25.9
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-15 87.4 344 23.8
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-15 87.4 295 24.4
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 6.9e-15 87.4 323 23.5
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.5e-14 86.3 370 24.1
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.5e-14 86.3 204 29.4
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 2.0e-14 85.9 360 23.9
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.6e-14 84.0 193 26.4
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 7.6e-14 84.0 196 26.5
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 7.6e-14 84.0 153 30.1
vmacro19840 Vaccinium macrocarpon HOM05D007376 ORTHO05D018824 9.9e-14 83.6 187 29.9
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-13 82.8 127 33.9
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-13 82.8 127 33.9
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-13 82.8 127 33.9
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-13 82.8 127 33.9
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-13 82.8 127 33.9
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-13 82.8 127 33.9
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-13 82.8 127 33.9
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.2e-13 82.4 127 33.9
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.9e-13 82.0 208 26.9
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 4.9e-13 81.3 162 30.9
Rhsim06G0146000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-12 79.0 86 52.3
RhsimUnG0042600 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.1e-12 77.4 429 27.3
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 1.2e-11 76.6 264 25.8
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 1.6e-11 76.3 271 25.1
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-11 75.9 127 31.5
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 2.7e-11 75.5 321 24.3
Rhsim03G0174200 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.0e-11 74.3 104 32.7
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.0e-11 74.3 329 28.9
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.9e-11 73.9 170 25.3
vmacro05424 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.3e-10 73.2 207 26.1
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 5.1e-10 71.2 316 25.0
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 1.1e-09 70.1 154 29.9
Rhsim02G0074500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-09 69.7 420 26.9
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-09 67.8 75 52.0
Rhsim09G0046000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-09 67.8 156 30.8
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-08 66.6 428 22.4
CSS0022351 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 3.6e-08 65.1 84 40.5
CSS0018414 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 4.8e-08 64.7 82 42.7
CSS0027839 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.2e-08 64.3 150 25.3
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 6.2e-08 64.3 282 20.6
CSS0001173 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 8.1e-08 63.9 109 32.1
RcHm_v2.0_Chr0c19g0500051 Rosa chinensis HOM05D001313 ORTHO05D001590 1.1e-07 63.5 159 24.5
CSS0041926 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 4.0e-07 61.6 76 39.5
CSS0042257 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 4.0e-07 61.6 76 39.5
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.0e-07 61.6 185 26.5
CSS0012382 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 5.3e-07 61.2 84 38.1
FAN15G3309 Fragaria x ananassa HOM05D012588 ORTHO05D001590 5.3e-07 61.2 217 25.8
FvH4_2g08390 Fragaria vesca HOM05D001313 ORTHO05D013602 6.9e-07 60.8 153 25.5
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.2e-06 60.1 263 24.7
vmacro05246 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.2e-06 60.1 80 42.5
Rhsim01G0158100 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.5e-06 59.7 169 26.6
Rhsim07G0128100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-06 59.7 87 43.7
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.5e-06 59.7 64 42.2
Haze_20776 Corylus avellana HOM05D012958 ORTHO05D034895 2.6e-06 58.9 60 53.3
FvH4_5g27850 Fragaria vesca HOM05D001313 ORTHO05D013602 2.6e-06 58.9 153 24.8
FvH4_6g44210 Fragaria vesca HOM05D001313 ORTHO05D013602 2.6e-06 58.9 153 24.8
FAN18G1258 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.4e-06 58.5 360 23.1
FAN24G1109 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.5e-06 58.2 153 25.5
RcHm_v2.0_Chr5g0041501 Rosa chinensis HOM05D001313 ORTHO05D001590 4.5e-06 58.2 260 20.8
FAN21G2373 Fragaria x ananassa HOM05D001313 ORTHO05D001590 7.6e-06 57.4 153 24.2
FAN24G1273 Fragaria x ananassa HOM05D001313 ORTHO05D001590 7.6e-06 57.4 153 24.2
FvH4_4g09920 Fragaria vesca HOM05D001313 ORTHO05D001590 9.9e-06 57.0 153 24.2
FAN12G0772 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.9e-06 57.0 153 24.8


User provided reference genes

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