Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0046200 Rhododendron simsii HOM05D003552 ORTHO05D006018 1.7e-149 532.7 280 100.0
Rhsim06G0088600 Rhododendron simsii HOM05D003552 ORTHO05D006018 4.9e-56 222.2 230 59.6
Rhsim02G0153600 Rhododendron simsii HOM05D003552 ORTHO05D006018 2.5e-44 183.3 123 76.4
Rhsim10G0114300 Rhododendron simsii HOM05D010712 ORTHO05D006018 4.0e-42 176.0 247 48.2
CSS0007962 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.5e-20 104.4 124 45.2
CSS0001933 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.9e-20 104.0 127 44.9
CSS0006123 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.5e-20 103.6 127 44.1
CSS0017860 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.5e-20 103.6 127 44.1
CSS0036728 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.5e-20 103.6 127 44.1
CSS0014396 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.3e-20 102.8 127 44.9
CSS0008891 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.6e-20 101.7 127 43.3
CSS0038459 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.2e-19 101.3 127 44.1
CSS0030445 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.1e-19 100.5 127 43.3
vmacro12924 Vaccinium macrocarpon HOM05D000826 ORTHO05D001831 1.1e-18 98.2 144 39.6
CSS0007901 Camellia sinensis var. sinensis HOM05D012151 ORTHO05D006018 7.6e-17 92.0 133 42.1
CSS0031550 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.2e-15 86.7 168 35.7
CSS0009479 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.3e-15 85.1 137 38.0
CSS0008810 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.2e-14 84.7 138 38.4
CSS0007585 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.6e-14 84.3 189 34.9
CSS0049321 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.7e-14 83.6 138 37.7
CSS0042845 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.5e-14 83.2 135 37.8
CSS0048857 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.0e-14 82.4 138 37.7
CSS0032514 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.8e-14 82.0 138 37.7
CSS0006027 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.0e-13 81.6 138 37.7
CSS0027497 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.0e-13 81.6 138 37.7
CSS0043317 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.0e-13 81.6 138 37.7
CSS0048903 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.0e-13 81.6 139 34.5
CSS0012972 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.3e-13 81.3 138 37.0
CSS0039431 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.3e-13 81.3 138 37.0
CSS0013886 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.7e-13 80.9 138 37.0
CSS0022835 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.7e-13 80.9 138 37.7
CSS0041208 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.7e-13 80.9 120 41.7
CSS0012980 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.0e-13 80.1 135 36.3
CSS0040911 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.0e-13 80.1 135 37.8
CSS0045286 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 3.0e-13 80.1 142 33.8
QL01p024136 Quercus lobata HOM05D009834 ORTHO05D012892 3.0e-13 80.1 140 35.0
CSS0023354 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 3.9e-13 79.7 181 30.9
CSS0033407 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.9e-13 79.7 189 32.8
CSS0037611 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 3.9e-13 79.7 135 35.6
CSS0050133 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.9e-13 79.7 140 36.4
CSS0005159 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.6e-13 79.0 138 37.0
CSS0005466 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.6e-13 79.0 138 37.0
CSS0011533 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.6e-13 79.0 138 35.5
CSS0038610 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.6e-13 79.0 133 36.8
CSS0008845 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 8.7e-13 78.6 138 37.0
CSS0028174 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.5e-12 77.8 138 36.2
CSS0001155 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.9e-12 77.4 138 34.8
CSS0013634 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.5e-12 77.0 135 35.6
CSS0042085 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.5e-12 77.0 140 35.7
CSS0015189 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.3e-12 76.6 126 37.3
CSS0011457 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.3e-12 76.3 189 32.8
CSS0046722 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.3e-12 76.3 230 30.4
CSS0011259 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.3e-12 75.5 133 35.3
CSS0025998 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.3e-12 75.5 97 40.2
CSS0008736 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.3e-11 74.7 110 38.2
CSS0034030 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.3e-11 74.7 135 34.8
CSS0045382 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.3e-11 74.7 138 35.5
QL12p022170 Quercus lobata HOM05D009834 ORTHO05D012892 1.3e-11 74.7 106 37.7
CSS0037180 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 2.1e-11 73.9 109 38.5
QL01p001433 Quercus lobata HOM05D009834 ORTHO05D012892 2.1e-11 73.9 106 37.7
CSS0010639 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 2.8e-11 73.6 142 33.8
CSS0027151 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.8e-11 73.6 116 36.2
CSS0047382 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.6e-11 73.2 124 33.9
CSS0004868 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 4.8e-11 72.8 138 34.1
CSS0012193 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.8e-11 72.8 103 39.8
CSS0038054 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.8e-11 72.8 155 33.5
CSS0015287 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 8.1e-11 72.0 116 34.5
CSS0025081 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 8.1e-11 72.0 133 36.8
CSS0037818 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 8.1e-11 72.0 109 36.7
CSS0046219 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 8.1e-11 72.0 133 35.3
CSS0047926 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 8.1e-11 72.0 135 32.6
QL04p095280 Quercus lobata HOM05D009834 ORTHO05D012892 8.1e-11 72.0 106 36.8
CSS0031881 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.1e-10 71.6 116 35.3
CSS0043200 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.1e-10 71.6 133 34.6
CSS0047662 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.1e-10 71.6 139 31.7
CSS0029299 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.4e-10 71.2 128 32.8
CSS0036793 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.8e-10 70.9 116 36.2
CSS0045818 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.8e-10 70.9 116 35.3
CSS0024929 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.4e-10 70.5 116 35.3
CSS0035726 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.4e-10 70.5 116 35.3
CSS0001140 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.1e-10 70.1 116 35.3
CSS0049581 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.1e-10 70.1 116 35.3
CSS0003114 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.0e-10 69.7 116 35.3
CSS0042004 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.0e-10 69.7 128 35.2
Rhsim06G0114800 Rhododendron simsii HOM05D010712 ORTHO05D006018 5.3e-10 69.3 42 81.0
CSS0043674 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 9.0e-10 68.6 110 35.5
CSS0049765 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.0e-10 68.6 138 32.6
CSS0017470 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.2e-09 68.2 124 34.7
CSS0015065 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.5e-09 67.8 132 36.4
CSS0025994 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.0e-09 67.4 116 34.5
CSS0015526 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.6e-09 67.0 116 34.5
CSS0019131 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.6e-09 67.0 116 33.6
CSS0035411 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.6e-09 67.0 132 36.4
CSS0014310 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 4.4e-09 66.2 139 30.2
CSS0017663 Camellia sinensis var. sinensis HOM05D011501 ORTHO05D006018 4.4e-09 66.2 207 32.4
CSS0047062 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.6e-09 65.5 180 31.7
CSS0017177 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.3e-08 64.7 116 32.8
CSS0047058 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.3e-08 64.7 114 36.0
CSS0022859 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.7e-08 64.3 132 37.9
CSS0027236 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.7e-08 64.3 186 31.7
CSS0025361 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.8e-08 63.2 138 34.1
Rhsim04G0192000 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.8e-08 63.2 124 32.3
CSS0032148 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.1e-07 61.6 116 32.8
Rhsim11G0039100 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-07 61.6 124 33.1
Rhsim01G0161400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.4e-07 61.2 124 33.1
Rhsim03G0108900 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.4e-07 61.2 188 29.8
Rhsim13G0002100 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.4e-07 61.2 124 33.1
RhsimUnG0189300 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.4e-07 61.2 124 33.1
RhsimUnG0190700 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.4e-07 61.2 124 33.1
CSS0003457 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D000081 1.9e-07 60.8 98 38.8
QL93p0348_0001 Quercus lobata HOM05D009834 ORTHO05D012892 1.9e-07 60.8 140 27.9
Rhsim09G0075400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.9e-07 60.8 124 33.1
CSS0011911 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.4e-07 60.5 267 26.6
CSS0023305 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.2e-07 60.1 116 31.9
Rhsim09G0045500 Rhododendron simsii HOM05D010712 ORTHO05D017107 4.2e-07 59.7 53 60.4
CSS0017755 Camellia sinensis var. sinensis HOM05D012151 ORTHO05D006018 5.4e-07 59.3 133 36.8
CSS0033548 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 5.4e-07 59.3 107 35.5
Rhsim01G0093200 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.4e-07 59.3 124 32.3
QL09p047175 Quercus lobata HOM05D009834 ORTHO05D012892 7.1e-07 58.9 106 33.0
Rhsim06G0074500 Rhododendron simsii HOM05D008406 ORTHO05D010960 7.1e-07 58.9 124 32.3
CSS0050510 Camellia sinensis var. sinensis HOM05D012151 ORTHO05D006018 9.3e-07 58.5 133 32.3
CSS0049054 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.2e-06 58.2 73 42.5
CSS0002865 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.6e-06 57.8 131 34.4
CSS0036149 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.6e-06 57.8 131 34.4
CSS0003874 Camellia sinensis var. sinensis HOM05D011501 ORTHO05D006018 2.1e-06 57.4 103 33.0
CSS0018688 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.1e-06 57.4 114 34.2
Rhsim03G0059200 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.7e-06 57.0 124 30.6
Rhsim02G0192500 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.6e-06 56.2 124 31.5
Rhsim06G0114700 Rhododendron simsii HOM05D010712 ORTHO05D017107 4.6e-06 56.2 55 58.2
CSS0044192 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.0e-06 55.8 113 34.5
QL01p054291 Quercus lobata HOM05D009834 ORTHO05D012892 6.0e-06 55.8 100 33.0
QL01p054764 Quercus lobata HOM05D009834 ORTHO05D012892 6.0e-06 55.8 100 33.0


User provided reference genes

Program Settings