Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 6.8e-123 444.1 243 100.0
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 1.4e-46 190.7 245 49.0
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 4.5e-34 149.1 140 58.6
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 1.2e-26 124.4 211 42.7
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 5.9e-26 122.1 201 44.8
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 6.6e-25 118.6 209 39.2
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 6.6e-25 118.6 209 39.2
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 1.5e-24 117.5 212 39.6
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 3.3e-24 116.3 174 43.7
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 8.9e-22 108.2 180 42.2
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 8.9e-22 108.2 187 41.7
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 2.0e-21 107.1 199 38.2
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 4.4e-21 105.9 209 37.3
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 7.5e-21 105.1 206 37.4
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 4.9e-20 102.4 212 37.7
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 1.1e-19 101.3 208 38.5
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.1e-19 101.3 158 43.7
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 1.4e-19 100.9 209 38.3
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.4e-19 100.9 129 48.1
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.8e-19 100.5 202 38.1
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 3.2e-19 99.8 202 37.1
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 4.5e-18 95.9 156 43.6
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.0e-17 94.7 116 50.0
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 2.3e-17 93.6 203 38.4
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 2.9e-17 93.2 203 38.9
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 5.0e-17 92.4 204 34.8
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 1.1e-16 91.3 192 37.0
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 3.3e-16 89.7 201 36.8
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 9.5e-16 88.2 208 35.1
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 1.6e-15 87.4 190 36.8
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 1.6e-15 87.4 203 36.0
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 6.1e-15 85.5 163 38.7
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 8.0e-15 85.1 191 38.2
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 3.1e-14 83.2 190 38.4
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 5.2e-14 82.4 189 34.4
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 8.9e-14 81.6 210 32.4
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.5e-13 80.9 202 32.7
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 2.6e-13 80.1 208 35.6
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 4.4e-13 79.3 225 34.7
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 5.8e-13 79.0 147 36.1
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 5.8e-13 79.0 172 36.6
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 7.5e-13 78.6 164 32.9
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.7e-12 77.4 200 32.5
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.2e-12 77.0 103 44.7
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 3.7e-12 76.3 119 41.2
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 3.7e-12 76.3 157 36.3
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 6.4e-12 75.5 189 32.3
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 8.3e-12 75.1 156 36.5
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 8.3e-12 75.1 109 43.1
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 1.4e-11 74.3 189 36.0
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 2.4e-11 73.6 175 33.7
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 2.4e-11 73.6 119 38.7
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 9.2e-11 71.6 119 42.9
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 1.2e-10 71.2 176 33.5
Migut.G00556 Erythranthe guttata HOM05D008157 ORTHO05D009575 1.6e-10 70.9 110 40.9
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.7e-10 70.1 116 40.5
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 3.5e-10 69.7 192 34.4
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 4.6e-10 69.3 116 38.8
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 7.8e-10 68.6 192 33.3
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 1.7e-09 67.4 205 32.7
Potri.014G192701 Populus trichocarpa HOM05D008157 ORTHO05D009575 3.0e-09 66.6 172 33.1
Lsat_1_v5_gn_6_66080 Lactuca sativa HOM05D008157 ORTHO05D035152 1.9e-08 63.9 165 33.9
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 2.5e-08 63.5 130 40.0
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 4.3e-08 62.8 115 36.5
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 7.3e-08 62.0 121 35.5
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 3.6e-07 59.7 115 37.4
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 4.7e-07 59.3 230 28.7
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.8e-06 57.4 97 39.2
FAN17G2184 Fragaria x ananassa HOM05D008157 ORTHO05D009575 4.0e-06 56.2 107 40.2
THA.LOC104808976 Tarenaya hassleriana HOM05D012000 ORTHO05D013959 4.0e-06 56.2 175 26.9
CDE01G0186 Ceratophyllum demersum HOM05D008157 ORTHO05D009575 5.2e-06 55.8 206 28.2


User provided reference genes

Program Settings