Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0039900 Rhododendron simsii HOM05D007314 ORTHO05D003768 2.5e-110 402.1 205 100.0
Rhsim05G0198600 Rhododendron simsii HOM05D000030 ORTHO05D003768 1.1e-49 200.7 180 65.0
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 9.1e-36 154.5 146 63.0
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.0e-30 136.7 224 43.3
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 8.2e-29 131.3 178 48.9
RhsimUnG0146400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-28 130.2 86 80.2
Rhsim10G0166000 Rhododendron simsii HOM05D007314 ORTHO05D009316 1.0e-23 114.4 203 39.9
Rhsim11G0005700 Rhododendron simsii HOM05D007314 ORTHO05D009316 4.2e-17 92.4 114 50.0
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.9e-13 79.0 118 43.2
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 8.3e-13 78.2 192 33.9
Rhsim04G0076700 Rhododendron simsii HOM05D007314 ORTHO05D009316 2.0e-11 73.6 58 69.0
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 7.8e-11 71.6 136 40.4
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 6.6e-10 68.6 110 41.8
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.5e-09 67.4 104 44.2
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 1.9e-09 67.0 132 35.6
Rhsim01G0163400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-09 66.6 47 70.2
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 4.3e-09 65.9 111 38.7
Rhsim01G0098700 Rhododendron simsii HOM05D007314 ORTHO05D010380 7.3e-09 65.1 172 33.1
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 9.5e-09 64.7 113 39.8
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 1.2e-08 64.3 132 33.3
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 1.2e-08 64.3 111 38.7
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 1.2e-08 64.3 150 31.3
Oeu016711.1 Olea europaea HOM05D023826 ORTHO05D003768 3.6e-08 62.8 105 37.1
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 8.0e-08 61.6 150 32.7
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 8.9e-07 58.2 111 36.0
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-06 57.8 134 34.3
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-06 57.4 68 48.5
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 4.4e-06 55.8 43 65.1
Sed0001469 Sechium edule HOM05D007314 ORTHO05D003768 7.5e-06 55.1 79 38.0
Sed0011465 Sechium edule HOM05D007314 ORTHO05D003768 7.5e-06 55.1 79 38.0


User provided reference genes

Program Settings