Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 3.1e-134 481.9 252 100.0
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 2.7e-130 468.8 252 96.0
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.3e-124 449.9 252 89.7
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 3.5e-122 441.8 252 88.5
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.2e-119 433.3 252 87.3
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 89.7
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 1.6e-119 433.0 251 88.4
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 2.1e-119 432.6 252 87.7
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 4.7e-119 431.4 252 87.7
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.1e-118 430.3 252 86.1
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 1.4e-118 429.9 252 87.3
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 88.9
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 3.1e-118 428.7 252 88.5
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 4.0e-118 428.3 250 86.0
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 5.2e-118 427.9 252 87.7
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 6.8e-118 427.6 252 88.1
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 6.8e-118 427.6 252 85.7
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 8.9e-118 427.2 252 86.5
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 1.5e-117 426.4 252 85.7
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 5.8e-117 424.5 252 87.3
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 86.9
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 85.3
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 9.9e-117 423.7 252 85.3
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 1.3e-116 423.3 252 83.7
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 1.3e-116 423.3 252 86.1
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 87.7
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 2.2e-116 422.5 252 85.3
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 87.3
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 6.4e-116 421.0 252 86.1
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 85.3
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 86.9
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 85.3
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 1.4e-115 419.9 252 84.5
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 1.9e-115 419.5 254 85.0
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 86.1
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 85.3
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 84.1
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 85.3
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 9.2e-115 417.2 252 85.7
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 1.2e-114 416.8 250 84.4
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 1.6e-114 416.4 252 84.9
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 83.3
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 84.9
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 3.5e-114 415.2 252 83.7
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 3.5e-114 415.2 252 83.7
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 3.5e-114 415.2 252 84.9
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 4.6e-114 414.8 252 84.5
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 6.0e-114 414.5 254 83.9
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 84.5
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 1.3e-113 413.3 252 83.3
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 2.3e-113 412.5 281 77.9
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 84.5
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 3.9e-113 411.8 256 83.2
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 6.6e-113 411.0 256 83.2
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 8.7e-113 410.6 252 82.9
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 85.3
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.5e-112 409.8 253 85.0
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 83.3
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 7.3e-112 407.5 250 82.4
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 7.3e-112 407.5 252 82.9
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.2e-111 406.8 252 82.5
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 1.6e-111 406.4 252 83.7
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 2.1e-111 406.0 252 82.1
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 2.1e-111 406.0 248 83.1
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 2.1e-111 406.0 283 76.0
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 2.8e-111 405.6 252 82.1
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 2.8e-111 405.6 253 83.0
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 4.7e-111 404.8 252 82.1
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 2.4e-110 402.5 230 88.7
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 80.6
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 81.3
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 3.4e-109 398.7 283 74.2
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 4.4e-109 398.3 260 80.8
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 4.4e-109 398.3 252 80.6
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 5.8e-109 397.9 252 80.2
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 7.6e-109 397.5 252 80.6
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 1.7e-108 396.4 253 77.9
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 4.9e-108 394.8 252 79.4
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 1.4e-107 393.3 252 79.8
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 7.1e-107 391.0 252 79.4
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 4.6e-106 388.3 252 79.0
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 5.1e-105 384.8 249 79.5
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 6.6e-105 384.4 252 79.4
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 8.7e-105 384.0 252 77.0
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 8.7e-105 384.0 254 78.3
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 1.1e-104 383.6 249 79.5
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 7.3e-104 380.9 249 79.1
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 1.8e-102 376.3 256 75.0
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 3.1e-102 375.6 259 76.4
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 3.1e-102 375.6 252 76.2
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 1.5e-101 373.2 254 74.0
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 2.6e-101 372.5 252 77.4
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 4.5e-101 371.7 256 73.8
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 8.4e-100 367.5 272 75.4
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 4.6e-98 361.7 252 74.2
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 3.3e-96 355.5 221 81.9
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 2.8e-95 352.4 267 69.3
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 5.8e-93 344.7 252 73.4
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 5.5e-91 338.2 260 70.0
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 2.0e-85 319.7 191 84.3
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 3.4e-85 318.9 190 84.7
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 2.1e-82 309.7 274 64.2
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 7.9e-82 307.8 177 88.1
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.8e-81 306.6 176 87.5
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 2.2e-79 299.7 252 61.9
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 2.8e-79 299.3 177 88.1
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 4.2e-75 285.4 229 66.4
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 4.3e-72 275.4 255 56.9
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 4.8e-71 271.9 278 54.7
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 9.4e-67 257.7 155 85.2
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 3.9e-65 252.3 252 56.3
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 1.1e-64 250.8 255 54.1
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 7.7e-61 238.0 146 82.2
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.0e-56 223.4 254 48.0
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 2.1e-50 203.4 123 78.9
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 3.5e-37 159.5 91 87.9
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 5.5e-35 152.1 108 75.0
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 2.8e-34 149.8 96 76.0
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 1.6e-26 124.0 117 59.0
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 6.2e-18 95.5 68 67.6
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 5.4e-14 82.4 48 83.3
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 3.6e-10 69.7 34 88.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 8.1e-10 68.6 61 60.7
Actinidia11341 Actinidia chinensis HOM05D006457 ORTHO05D056652 3.1e-09 66.6 40 82.5


User provided reference genes

Program Settings