Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0033800 Rhododendron simsii HOM05D026694 ORTHO05D003288 1.7e-271 938.7 460 100.0
Rhsim10G0010700 Rhododendron simsii HOM05D000071 ORTHO05D000029 5.9e-83 312.4 157 98.1
Rhsim07G0196300 Rhododendron simsii HOM05D000013 ORTHO05D000011 1.0e-39 168.7 107 77.6
Rhsim01G0164200 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.8e-24 117.5 145 49.7
Rhsim01G0085000 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.0e-22 111.3 145 47.6
Rhsim02G0051600 Rhododendron simsii HOM05D026694 ORTHO05D003288 1.5e-17 95.1 81 55.6
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 4.4e-14 83.6 51 78.4
RhsimUnG0233400 Rhododendron simsii HOM05D000906 ORTHO05D000713 5.8e-14 83.2 71 64.8
vmacro13801 Vaccinium macrocarpon HOM05D026694 ORTHO05D003288 7.5e-14 82.8 72 52.8
TAR362G0788 Trochodendron aralioides HOM05D000162 ORTHO05D003288 1.3e-10 72.0 92 37.0
vmacro13717 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.9e-10 70.5 69 50.7
BraA10t43029Z Brassica rapa HOM05D000162 ORTHO05D000090 3.3e-09 67.4 88 37.5
ECA238G1168 Erigeron canadensis HOM05D000162 ORTHO05D000090 3.3e-09 67.4 71 42.3
A09p64860 Brassica napus HOM05D000162 ORTHO05D003288 2.1e-08 64.7 87 40.2
FAN05G4416 Fragaria x ananassa HOM05D009709 ORTHO05D003288 3.6e-08 63.9 78 38.5
HanXRQChr13g0420261 Helianthus annuus HOM05D022346 ORTHO05D003288 1.1e-07 62.4 89 36.0
C04p29110 Brassica napus HOM05D000162 ORTHO05D003288 2.4e-07 61.2 88 37.5
Thecc.05G003500 Theobroma cacao HOM05D008684 ORTHO05D010796 2.4e-07 61.2 84 34.5
vmacro00540 Vaccinium macrocarpon HOM05D026694 ORTHO05D003288 2.4e-07 61.2 47 61.7
HanXRQChr08g0236261 Helianthus annuus HOM05D001779 ORTHO05D001753 3.1e-07 60.8 85 32.9
EL10Ac4g09525 Beta vulgaris HOM05D000162 ORTHO05D000090 4.0e-07 60.5 87 31.0
EL10Ac4g09526 Beta vulgaris HOM05D000162 ORTHO05D003288 4.0e-07 60.5 87 31.0
arahy.Tifrunner.gnm1.ann1.U8UX16 Arachis hypogaea HOM05D000239 ORTHO05D009715 8.9e-07 59.3 69 40.6
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 1.2e-06 58.9 100 36.0
Cpa.g.sc108.57 Carica papaya HOM05D007358 ORTHO05D009117 1.2e-06 58.9 108 34.3
HanXRQChr15g0491421 Helianthus annuus HOM05D022346 ORTHO05D003288 1.2e-06 58.9 89 33.7
Actinidia01757 Actinidia chinensis HOM05D000424 ORTHO05D000355 1.5e-06 58.5 104 28.8
QL09p032747 Quercus lobata HOM05D000424 ORTHO05D000355 2.0e-06 58.2 83 33.7
PGSC0003DMG400008611 Solanum tuberosum HOM05D001779 ORTHO05D001753 2.0e-06 58.2 85 30.6
arahy.Tifrunner.gnm1.ann1.90GDKS Arachis hypogaea HOM05D008100 ORTHO05D009715 2.6e-06 57.8 67 41.8
Prupe.6G195700 Prunus persica HOM05D009709 ORTHO05D003288 3.4e-06 57.4 78 35.9
CANSAT78G0097 Cannabis sativa HOM05D008684 ORTHO05D010796 4.4e-06 57.0 84 31.0
CAN.G484.86 Capsicum annuum HOM05D001779 ORTHO05D001753 4.4e-06 57.0 110 27.3
ECA240G3581 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-06 56.6 70 40.0
HanXRQChr07g0205001 Helianthus annuus HOM05D000162 ORTHO05D000090 7.6e-06 56.2 83 37.3
Rhsim04G0237200 Rhododendron simsii HOM05D040245 ORTHO05D003288 7.6e-06 56.2 49 53.1
HanXRQChr07g0203991 Helianthus annuus HOM05D000162 ORTHO05D000090 9.9e-06 55.8 67 41.8
HanXRQChr08g0216881 Helianthus annuus HOM05D022251 ORTHO05D003288 9.9e-06 55.8 72 38.9
RcHm_v2.0_Chr5g0074181 Rosa chinensis HOM05D009709 ORTHO05D003288 9.9e-06 55.8 79 39.2


User provided reference genes

Program Settings