Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 5.2e-111 404.4 212 100.0
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 5.1e-42 175.3 200 56.5
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 1.1e-41 174.1 202 55.9
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 1.0e-29 134.4 149 55.0
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 1.0e-29 134.4 179 50.8
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 1.0e-29 134.4 183 50.8
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 2.1e-27 126.7 227 42.7
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 8.8e-26 121.3 157 51.0
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 2.0e-25 120.2 180 46.7
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 5.7e-25 118.6 203 43.3
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 9.8e-25 117.9 160 51.2
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 9.8e-25 117.9 201 43.3
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 1.3e-24 117.5 159 50.3
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 1.1e-23 114.4 165 47.9
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 4.1e-23 112.5 186 42.5
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 4.1e-23 112.5 191 42.4
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 5.4e-23 112.1 169 46.7
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 2.0e-22 110.2 157 46.5
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 2.7e-22 109.8 160 47.5
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 3.5e-22 109.4 184 45.1
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 4.5e-22 109.0 159 45.3
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 4.5e-22 109.0 171 46.8
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 4.5e-22 109.0 207 40.6
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 2.2e-21 106.7 189 43.4
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 2.2e-21 106.7 159 44.7
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 3.8e-21 105.9 170 42.4
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 1.1e-20 104.4 173 41.0
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 2.5e-20 103.2 159 47.2
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 7.2e-20 101.7 163 45.4
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 9.4e-20 101.3 169 43.2
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 2.1e-19 100.1 222 38.3
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 1.0e-18 97.8 191 41.4
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 3.0e-18 96.3 127 50.4
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 1.5e-17 94.0 239 36.4
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 2.0e-17 93.6 168 41.7
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 1.8e-15 87.0 173 38.7
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 1.8e-15 87.0 149 38.3
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 4.1e-15 85.9 204 35.3
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 9.5e-12 74.7 179 34.1
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 3.0e-10 69.7 163 34.4
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 3.0e-10 69.7 147 36.7
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 2.2e-08 63.5 89 43.8
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 3.7e-08 62.8 137 40.9
Migut.N01183 Erythranthe guttata HOM05D003014 ORTHO05D003233 2.0e-06 57.0 171 29.8
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 4.6e-06 55.8 164 32.3


User provided reference genes

Program Settings