Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0256100 Rhododendron simsii HOM05D006943 ORTHO05D008565 4.5e-98 361.3 188 100.0
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 6.4e-20 101.7 72 68.1
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 1.9e-19 100.1 71 71.8
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 3.1e-14 82.8 89 51.7
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 6.9e-14 81.6 126 41.3
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 3.8e-12 75.9 117 42.7
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 1.6e-10 70.5 78 47.4
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 1.6e-10 70.5 78 47.4
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 6.0e-10 68.6 96 43.8
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 7.9e-10 68.2 96 43.8
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 7.9e-10 68.2 101 43.6
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 1.8e-09 67.0 78 51.3
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 1.8e-09 67.0 124 40.3
MSTRG.13928 Avicennia marina HOM05D006943 ORTHO05D008565 2.3e-09 66.6 102 43.1
MSTRG.13939 Avicennia marina HOM05D006943 ORTHO05D008565 5.1e-09 65.5 102 42.2
MSTRG.13926 Avicennia marina HOM05D006943 ORTHO05D008565 6.7e-09 65.1 102 43.1
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 6.7e-09 65.1 71 47.9
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 6.7e-09 65.1 121 38.8
MSTRG.13927 Avicennia marina HOM05D006943 ORTHO05D008565 8.7e-09 64.7 102 42.2
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 1.1e-08 64.3 104 40.4
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 1.5e-08 63.9 72 51.4
Actinidia03335 Actinidia chinensis HOM05D006943 ORTHO05D008565 3.3e-08 62.8 105 40.0
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 3.3e-08 62.8 117 35.9
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 3.3e-08 62.8 116 31.9
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.3e-07 60.8 124 34.7
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.3e-07 60.8 124 35.5
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 2.8e-07 59.7 118 38.1
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 2.8e-07 59.7 72 43.1
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 8.1e-07 58.2 101 35.6
Thecc.09G002300 Theobroma cacao HOM05D006943 ORTHO05D008565 8.1e-07 58.2 99 38.4
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 1.8e-06 57.0 72 41.7
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 2.4e-06 56.6 148 35.1
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 4.0e-06 55.8 72 45.8
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 6.9e-06 55.1 116 34.5


User provided reference genes

Program Settings