Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 1.5e-170 602.8 323 100.0
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 4.0e-54 216.1 285 48.8
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 2.1e-50 203.8 246 49.2
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 2.1e-47 193.7 283 46.3
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 1.2e-45 188.0 282 44.3
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 3.4e-45 186.4 284 42.6
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 2.9e-44 183.3 277 41.5
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 8.4e-44 181.8 284 42.6
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 1.1e-43 181.4 288 41.0
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 3.5e-42 176.4 274 43.8
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 7.8e-42 175.3 277 42.6
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 3.3e-40 169.9 275 40.4
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 3.6e-39 166.4 293 39.2
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 1.1e-38 164.9 279 41.9
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 1.8e-38 164.1 108 73.1
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 3.1e-38 163.3 98 81.6
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 6.9e-38 162.2 264 41.3
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 1.2e-37 161.4 277 42.2
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 2.0e-37 160.6 281 40.6
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 2.6e-37 160.2 276 36.2
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 3.4e-37 159.8 98 77.6
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 4.5e-37 159.5 101 76.2
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 5.8e-37 159.1 288 39.9
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 7.6e-37 158.7 102 74.5
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 7.6e-37 158.7 276 38.0
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 7.6e-37 158.7 281 40.6
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 9.9e-37 158.3 285 36.5
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.3e-36 157.9 283 40.3
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 1.3e-36 157.9 284 42.3
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 2.2e-36 157.1 276 37.7
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 3.8e-36 156.4 282 40.8
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 1.1e-35 154.8 282 37.9
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 9.3e-35 151.8 104 71.2
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 9.3e-35 151.8 283 38.9
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 9.3e-35 151.8 276 37.3
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 3.5e-34 149.8 117 63.2
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 4.6e-34 149.4 282 35.8
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 4.6e-34 149.4 283 38.9
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 6.0e-34 149.1 131 57.3
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 1.3e-33 147.9 282 35.5
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 1.3e-33 147.9 117 61.5
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 1.8e-33 147.5 101 66.3
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 3.0e-33 146.7 110 61.8
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 3.0e-33 146.7 231 42.0
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 5.1e-33 146.0 97 69.1
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 5.1e-33 146.0 285 37.2
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 3.3e-32 143.3 95 69.5
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 7.4e-32 142.1 111 64.9
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 1.3e-31 141.4 284 37.0
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 1.3e-31 141.4 282 36.5
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 1.6e-31 141.0 281 35.2
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 2.8e-31 140.2 101 67.3
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 2.8e-31 140.2 103 65.0
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 3.7e-31 139.8 288 37.8
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 8.1e-31 138.7 276 38.0
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 1.1e-30 138.3 281 35.6
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.1e-30 138.3 281 38.1
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 1.1e-30 138.3 281 34.9
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 1.4e-30 137.9 281 36.3
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.4e-30 137.9 116 59.5
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.4e-30 137.9 144 50.0
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 3.1e-30 136.7 155 48.4
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 4.0e-30 136.3 274 37.6
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 9.0e-30 135.2 277 35.7
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.2e-29 134.8 102 61.8
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.5e-29 134.4 98 61.2
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 1.5e-29 134.4 102 64.7
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 2.0e-29 134.0 289 36.7
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 2.0e-29 134.0 278 36.0
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 4.5e-29 132.9 276 35.5
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 5.8e-29 132.5 143 49.0
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 5.8e-29 132.5 226 38.1
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 5.8e-29 132.5 278 35.3
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 9.9e-29 131.7 104 62.5
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.3e-28 131.3 278 34.9
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 2.2e-28 130.6 94 64.9
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 2.2e-28 130.6 87 72.4
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-28 130.2 101 59.4
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 3.8e-28 129.8 95 63.2
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 4.9e-28 129.4 102 60.8
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 3.2e-27 126.7 285 31.6
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 4.2e-27 126.3 282 33.3
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 4.2e-27 126.3 287 34.5
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 7.1e-27 125.6 289 35.6
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.6e-26 124.4 104 62.5
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 1.6e-26 124.4 285 31.2
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 2.7e-26 123.6 95 64.2
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 1.0e-25 121.7 137 48.9
CSS0037252 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.5e-24 117.9 144 52.8
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 7.4e-24 115.5 100 56.0
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 6.2e-23 112.5 100 55.0
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 6.2e-23 112.5 100 55.0
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 6.2e-23 112.5 279 33.3
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 2.4e-22 110.5 101 53.5
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 9.0e-22 108.6 283 32.9
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.2e-21 108.2 273 32.2
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.2e-21 108.2 273 32.2
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 6.5e-20 102.4 79 65.8
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 5.9e-13 79.3 92 40.2
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 3.8e-12 76.6 89 43.8
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 4.2e-11 73.2 64 48.4
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 7.2e-11 72.4 94 35.1
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 1.5e-08 64.7 80 37.5


User provided reference genes

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