Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 9.3e-84 313.5 163 100.0
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 1.0e-37 160.6 87 92.0
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 6.5e-37 157.9 90 87.8
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 8.5e-37 157.5 87 89.7
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.5e-36 156.0 90 86.7
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 6.1e-35 151.4 87 86.2
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.0e-34 150.6 87 85.1
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 1.8e-34 149.8 87 83.9
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.8e-34 149.8 87 83.9
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 1.8e-34 149.8 90 81.1
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.3e-34 149.4 90 83.3
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 4.0e-34 148.7 87 82.8
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 5.2e-34 148.3 90 78.9
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 5.2e-34 148.3 86 86.0
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 5.2e-34 148.3 90 82.2
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 5.2e-34 148.3 90 82.2
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 1.2e-33 147.1 90 81.1
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 1.5e-33 146.7 90 81.1
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.5e-33 146.7 87 78.2
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 2.0e-33 146.4 90 77.8
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 2.0e-33 146.4 86 79.1
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 2.0e-33 146.4 90 81.1
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 2.6e-33 146.0 90 77.8
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 3.4e-33 145.6 90 77.8
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 3.4e-33 145.6 90 78.9
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 3.4e-33 145.6 90 81.1
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 3.4e-33 145.6 90 81.1
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 4.4e-33 145.2 90 76.7
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 4.4e-33 145.2 90 76.7
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 4.4e-33 145.2 90 76.7
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 4.4e-33 145.2 90 77.8
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 4.4e-33 145.2 90 76.7
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 4.4e-33 145.2 90 80.0
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 4.4e-33 145.2 90 75.6
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 5.7e-33 144.8 90 76.7
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 7.5e-33 144.4 90 81.1
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 9.8e-33 144.1 122 62.3
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 1.3e-32 143.7 90 77.8
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 1.3e-32 143.7 87 80.5
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.3e-32 143.7 90 77.8
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.3e-32 143.7 90 75.6
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.7e-32 143.3 90 76.7
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.7e-32 143.3 93 73.1
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 1.7e-32 143.3 86 77.9
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 1.7e-32 143.3 90 76.7
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 1.7e-32 143.3 86 80.2
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 2.8e-32 142.5 90 80.0
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 2.8e-32 142.5 90 76.7
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 3.7e-32 142.1 90 76.7
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 3.7e-32 142.1 86 80.2
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 4.8e-32 141.7 90 77.8
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 4.8e-32 141.7 86 79.1
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 4.8e-32 141.7 90 75.6
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 6.3e-32 141.4 89 77.5
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 6.3e-32 141.4 103 70.9
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 1.1e-31 140.6 90 73.3
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.1e-31 140.6 90 74.4
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.4e-31 140.2 90 74.4
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 1.4e-31 140.2 90 74.4
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 1.4e-31 140.2 90 76.7
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 1.4e-31 140.2 90 76.7
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.4e-31 140.2 86 76.7
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 1.8e-31 139.8 90 74.4
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 1.8e-31 139.8 90 73.3
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.8e-31 139.8 90 76.7
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 2.4e-31 139.4 90 76.7
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 2.4e-31 139.4 84 81.0
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.4e-31 139.4 87 74.7
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 3.1e-31 139.0 89 79.8
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 3.1e-31 139.0 87 74.7
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.1e-31 138.7 97 73.2
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 4.1e-31 138.7 86 77.9
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 4.1e-31 138.7 90 75.6
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 5.4e-31 138.3 108 65.7
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 7.0e-31 137.9 91 75.8
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 7.0e-31 137.9 91 75.8
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 7.0e-31 137.9 85 75.3
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 7.0e-31 137.9 90 72.2
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 1.2e-30 137.1 87 74.7
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 1.6e-30 136.7 87 74.7
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 2.0e-30 136.3 89 77.5
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 3.5e-30 135.6 90 73.3
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 3.5e-30 135.6 87 75.9
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 5.9e-30 134.8 86 74.4
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 7.7e-30 134.4 91 74.7
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 1.0e-29 134.0 87 73.6
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 1.3e-29 133.7 90 72.2
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 1.7e-29 133.3 94 72.3
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 1.7e-29 133.3 89 73.0
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 2.3e-29 132.9 84 73.8
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 2.9e-29 132.5 90 70.0
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 3.8e-29 132.1 90 71.1
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 5.0e-29 131.7 87 69.0
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.1e-28 130.6 90 68.9
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 1.5e-28 130.2 91 68.1
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 5.5e-28 128.3 124 58.1
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 9.5e-28 127.5 117 59.8
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 1.0e-26 124.0 88 64.8
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 1.8e-26 123.2 112 60.7
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 3.0e-26 122.5 82 70.7
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 4.4e-25 118.6 78 75.6
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 4.9e-24 115.2 70 81.4
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 4.9e-24 115.2 70 77.1
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 1.1e-23 114.0 86 67.4
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.1e-23 114.0 70 75.7
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 1.4e-23 113.6 86 67.4
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 3.2e-23 112.5 69 78.3
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 4.5e-22 108.6 68 76.5
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.0e-21 107.5 66 77.3
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 1.7e-21 106.7 79 67.1
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 2.3e-21 106.3 69 72.5
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 2.9e-21 105.9 63 77.8
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.3e-18 96.3 57 80.7
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.0e-17 93.2 71 67.6
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 3.4e-17 92.4 77 63.6
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 3.4e-17 92.4 68 63.2
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 3.4e-17 92.4 89 52.8
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 4.4e-17 92.0 60 71.7
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 4.9e-16 88.6 52 82.7
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 6.6e-13 78.2 93 45.2
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 8.0e-11 71.2 53 67.9
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 1.1e-10 70.9 90 44.4
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.9e-08 62.8 47 66.0
AUR62016546 Chenopodium quinoa HOM05D006090 ORTHO05D007600 4.6e-06 55.5 51 56.9


User provided reference genes

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