Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.3e-136 489.6 232 100.0
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 1.4e-96 356.7 203 82.8
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 3.0e-88 328.9 225 70.2
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 2.6e-87 325.9 225 69.3
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 3.6e-81 305.4 230 63.9
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 2.3e-80 302.8 225 67.1
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 2.6e-79 299.3 222 64.9
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 3.2e-77 292.4 227 60.4
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 7.0e-77 291.2 234 62.0
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 9.2e-77 290.8 225 62.2
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.3e-75 287.0 227 61.2
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.3e-75 287.0 226 60.6
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 3.0e-75 285.8 223 60.5
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 8.6e-75 284.3 220 64.1
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 1.5e-74 283.5 222 59.9
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 1.9e-74 283.1 225 61.8
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 1.9e-74 283.1 225 60.4
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 5.6e-74 281.6 224 60.3
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.1e-72 277.3 228 59.6
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.4e-72 276.9 226 58.0
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 2.3e-72 276.2 228 58.3
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 3.1e-72 275.8 226 61.1
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 3.4e-71 272.3 228 57.9
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 2.9e-70 269.2 223 60.5
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 4.9e-70 268.5 225 59.1
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 4.9e-70 268.5 220 58.6
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 6.4e-70 268.1 226 60.2
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 1.1e-69 267.3 227 56.8
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 1.2e-68 263.8 225 59.1
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 4.6e-68 261.9 236 58.5
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 7.8e-68 261.2 231 56.3
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 1.3e-67 260.4 226 57.1
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 2.3e-67 259.6 223 57.8
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 3.0e-67 259.2 222 58.1
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 1.1e-66 257.3 226 57.5
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 1.5e-66 256.9 221 57.9
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.5e-66 256.9 227 56.8
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 2.5e-66 256.1 230 57.0
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 3.3e-66 255.8 222 57.7
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 3.3e-66 255.8 220 54.5
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 2.1e-65 253.1 222 54.5
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 2.1e-65 253.1 223 56.1
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 2.8e-65 252.7 230 54.8
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 3.6e-65 252.3 222 55.4
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 4.7e-65 251.9 221 58.4
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 8.1e-65 251.1 220 56.4
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 8.1e-65 251.1 220 54.5
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.1e-64 250.8 226 57.1
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.4e-64 250.4 225 55.6
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.4e-64 250.4 222 55.0
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 1.8e-64 250.0 225 55.6
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 1.8e-64 250.0 221 53.4
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 2.4e-64 249.6 220 55.0
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 2.4e-64 249.6 224 56.2
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 8.9e-64 247.7 222 58.6
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 9.9e-63 244.2 222 54.5
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 1.7e-62 243.4 229 55.5
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 2.2e-62 243.0 228 53.5
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 4.9e-62 241.9 226 55.8
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 4.9e-62 241.9 222 54.1
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 2.4e-61 239.6 233 54.1
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 2.4e-61 239.6 227 52.0
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 2.4e-61 239.6 246 51.6
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 3.2e-61 239.2 222 54.1
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 3.2e-61 239.2 220 55.5
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 9.2e-61 237.7 188 60.6
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 9.2e-61 237.7 249 51.8
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.2e-60 237.3 229 52.4
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 2.7e-60 236.1 220 55.9
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 2.7e-60 236.1 220 55.9
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 3.5e-60 235.7 222 55.9
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 1.0e-59 234.2 218 55.5
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 1.3e-59 233.8 227 55.1
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 3.0e-59 232.6 168 66.1
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 5.1e-59 231.9 229 53.3
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 6.6e-59 231.5 228 53.9
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 5.6e-58 228.4 243 52.7
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 9.6e-58 227.6 141 74.5
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 2.8e-57 226.1 229 52.0
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 3.6e-57 225.7 220 51.8
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 1.1e-56 224.2 228 51.3
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 2.0e-55 219.9 229 52.8
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 4.2e-53 212.2 221 52.0
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 1.6e-52 210.3 161 64.0
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 6.0e-52 208.4 223 47.5
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 5.1e-51 205.3 221 48.4
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 5.1e-51 205.3 221 48.0
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 4.8e-49 198.7 215 47.9
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 1.5e-47 193.7 163 60.1
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 1.4e-45 187.2 138 62.3
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 7.1e-45 184.9 257 43.2
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 2.1e-44 183.3 216 46.3
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 6.7e-43 178.3 175 52.0
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 3.0e-35 152.9 117 59.0
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 1.1e-34 151.0 150 53.3
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 1.1e-34 151.0 108 66.7
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 1.6e-33 147.1 198 42.9
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 2.1e-33 146.7 192 42.2
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 1.9e-29 133.7 193 38.3
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 1.3e-27 127.5 151 44.4
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 1.4e-24 117.5 148 43.2
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 2.6e-23 113.2 96 54.2
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 7.9e-20 101.7 103 53.4
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 7.9e-20 101.7 102 51.0
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 7.9e-20 101.7 125 44.0
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 1.1e-18 97.8 226 31.4
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.1e-18 97.8 97 46.4
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 4.3e-18 95.9 137 42.3
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 4.1e-16 89.4 62 66.1
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 7.9e-12 75.1 58 56.9
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 1.2e-07 61.2 110 38.2
Haze_27326 Corylus avellana HOM05D003935 ORTHO05D005096 1.0e-06 58.2 202 25.7
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 2.9e-06 56.6 149 32.9


User provided reference genes

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