Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 5.9e-147 524.2 278 100.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 3.9e-90 335.5 291 67.4
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 6.2e-80 301.6 286 64.7
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 1.8e-79 300.1 295 62.4
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 2.0e-78 296.6 287 62.7
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 4.5e-78 295.4 295 63.1
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 2.2e-77 293.1 252 71.4
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 1.4e-76 290.4 290 63.4
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 3.2e-76 289.3 291 62.9
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 5.5e-76 288.5 291 62.9
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 1.2e-75 287.3 295 62.4
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 2.1e-75 286.6 295 62.7
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 6.0e-75 285.0 294 60.9
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 1.0e-74 284.3 287 61.7
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 2.3e-74 283.1 298 61.4
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 1.1e-73 280.8 296 61.1
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 3.3e-73 279.3 299 61.5
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 5.7e-73 278.5 298 61.1
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 7.4e-73 278.1 286 61.2
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 1.1e-71 274.2 291 63.2
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.4e-71 273.9 289 59.9
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 2.6e-70 269.6 291 59.1
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 2.6e-70 269.6 300 59.0
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 4.5e-70 268.9 289 59.2
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.7e-69 266.9 280 60.7
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 2.2e-69 266.5 291 59.8
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 2.2e-69 266.5 293 63.1
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 8.5e-69 264.6 285 60.7
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 4.2e-68 262.3 291 61.2
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 7.2e-68 261.5 288 58.7
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.2e-67 260.8 292 56.5
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.2e-67 260.8 298 60.1
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 3.6e-67 259.2 297 54.5
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 7.9e-67 258.1 302 58.6
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 2.3e-66 256.5 292 57.2
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 5.1e-66 255.4 284 56.3
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 1.5e-65 253.8 290 57.6
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.5e-65 253.1 295 56.9
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 2.5e-65 253.1 302 57.9
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 4.3e-65 252.3 295 56.9
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 9.7e-65 251.1 295 56.6
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.3e-64 250.8 295 56.6
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 1.3e-64 250.8 316 52.5
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 2.8e-64 249.6 296 56.8
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 4.8e-64 248.8 293 58.4
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 6.3e-64 248.4 284 56.7
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 8.2e-64 248.1 297 56.6
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 8.2e-64 248.1 295 56.9
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 2.4e-63 246.5 292 54.5
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 4.1e-63 245.7 298 54.7
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 9.1e-63 244.6 304 56.2
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 3.8e-61 239.2 283 59.0
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 2.1e-59 233.4 277 56.7
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 2.1e-59 233.4 285 54.0
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 6.1e-59 231.9 285 53.7
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 7.9e-59 231.5 291 54.0
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 1.0e-58 231.1 285 53.3
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 1.8e-58 230.3 310 51.9
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 3.0e-58 229.6 280 54.6
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 5.1e-58 228.8 295 54.9
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 1.1e-57 227.6 294 56.8
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 4.4e-57 225.7 258 60.9
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 1.7e-56 223.8 307 51.8
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 4.8e-56 222.2 289 52.2
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 8.2e-56 221.5 212 66.5
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.8e-55 220.3 289 52.6
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 1.2e-54 217.6 308 50.3
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.2e-54 217.6 282 51.8
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 3.5e-54 216.1 293 54.6
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 7.7e-54 214.9 279 57.7
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 7.7e-54 214.9 300 53.7
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.3e-53 214.2 298 52.7
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 5.0e-53 212.2 323 48.0
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 1.2e-51 207.6 268 53.7
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 2.1e-51 206.8 290 52.1
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 2.1e-51 206.8 290 52.1
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 2.7e-51 206.5 296 54.1
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 4.7e-51 205.7 260 53.8
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 1.4e-50 204.1 296 51.0
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 1.4e-50 204.1 295 52.2
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 3.0e-50 203.0 289 51.9
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 3.0e-50 203.0 291 54.0
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 5.2e-50 202.2 290 51.4
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 5.2e-50 202.2 289 50.9
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 5.2e-50 202.2 293 52.6
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 3.3e-49 199.5 262 54.6
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 1.4e-47 194.1 282 50.4
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 2.4e-47 193.4 289 49.1
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 4.1e-47 192.6 291 47.8
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 9.1e-47 191.4 301 51.5
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 1.6e-46 190.7 172 64.0
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 5.0e-45 185.7 292 46.9
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 5.0e-45 185.7 259 49.0
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 1.1e-44 184.5 242 54.1
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 6.8e-42 175.3 232 53.4
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 1.5e-41 174.1 262 50.0
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 9.7e-41 171.4 264 49.6
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 1.7e-40 170.6 239 51.9
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 4.1e-39 166.0 172 57.6
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.2e-38 164.5 184 57.6
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 2.2e-37 160.2 263 46.4
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 8.8e-34 148.3 289 41.2
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 2.4e-31 140.2 257 39.7
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.4e-26 124.4 239 41.0
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 1.8e-26 124.0 342 34.2
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 2.3e-26 123.6 258 43.0
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 5.7e-25 119.0 184 48.4
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 7.0e-23 112.1 122 66.4
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 2.0e-22 110.5 244 41.4
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 3.9e-21 106.3 184 45.7
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 8.6e-21 105.1 101 60.4
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 1.2e-14 84.7 97 55.7
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 6.0e-14 82.4 207 40.6
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 1.0e-13 81.6 82 59.8
vmacro15008 Vaccinium macrocarpon HOM05D002674 ORTHO05D426855 4.7e-11 72.8 35 94.3
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 1.4e-10 71.2 54 66.7
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 1.8e-10 70.9 85 51.8
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 1.8e-10 70.9 85 51.8
Rhsim01G0284900 Rhododendron simsii HOM05D000113 ORTHO05D008110 1.8e-10 70.9 34 97.1
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 4.0e-10 69.7 45 73.3
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 4.0e-10 69.7 45 73.3
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 1.2e-09 68.2 48 70.8
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 2.0e-09 67.4 42 73.8
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 2.6e-09 67.0 85 50.6
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 7.5e-09 65.5 38 78.9
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 7.5e-09 65.5 42 71.4
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 1.3e-08 64.7 48 68.8
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 2.9e-08 63.5 38 76.3
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 6.4e-08 62.4 38 76.3


User provided reference genes

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