Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0243200 Rhododendron simsii HOM05D000891 ORTHO05D011021 5.1e-87 324.3 158 100.0
CsaV3_3G041130 Cucumis sativus L. HOM05D000891 ORTHO05D011021 1.4e-23 113.6 187 39.0
PGR044G1927 Punica granatum HOM05D000891 ORTHO05D011021 1.8e-23 113.2 175 39.4
Lj8A737T25 Lonicera japonica HOM05D000891 ORTHO05D011021 1.1e-20 104.0 214 36.0
Ah.01g013050 Amaranthus hybridus HOM05D000891 ORTHO05D011021 1.1e-17 94.0 215 32.1
Dinv12793 Davidia involucrata HOM05D000891 ORTHO05D011021 1.9e-17 93.2 204 33.8
ECA233G3340 Erigeron canadensis HOM05D000891 ORTHO05D011021 2.5e-17 92.8 166 38.0
ClCG10G015370 Citrullus lanatus HOM05D000891 ORTHO05D011021 3.3e-17 92.4 143 42.0
Actinidia34496 Actinidia chinensis HOM05D000891 ORTHO05D011021 1.2e-14 84.0 59 69.5
CDE12G0148 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 9.8e-14 80.9 153 32.7
PGR044G0747 Punica granatum HOM05D000891 ORTHO05D011021 4.9e-13 78.6 185 33.0
QL03p043301 Quercus lobata HOM05D000891 ORTHO05D011021 1.1e-12 77.4 61 62.3
GSVIVG01010212001 Vitis vinifera HOM05D000891 ORTHO05D011021 1.1e-12 77.4 59 62.7
AUR62015183 Chenopodium quinoa HOM05D000891 ORTHO05D011021 1.9e-12 76.6 99 44.4
Actinidia26936 Actinidia chinensis HOM05D000891 ORTHO05D000761 2.1e-11 73.2 120 34.2
COL.COLO4_27643 Corchorus olitorius HOM05D000891 ORTHO05D011021 2.1e-11 73.2 59 62.7
MELO3C009843.2 Cucumis melo HOM05D000891 ORTHO05D011021 2.7e-11 72.8 178 31.5
Eucgr.J00281 Eucalyptus grandis HOM05D000891 ORTHO05D011021 2.7e-11 72.8 98 40.8
Duzib251G0184 Durio zibethinus HOM05D000891 ORTHO05D011021 3.5e-11 72.4 58 63.8
Duzib248G0648 Durio zibethinus HOM05D000891 ORTHO05D011021 4.6e-11 72.0 85 50.6
Thecc.02G309800 Theobroma cacao HOM05D000891 ORTHO05D011021 1.0e-10 70.9 58 63.8
Gohir.A13G026800 Gossypium hirsutum HOM05D000891 ORTHO05D011021 1.3e-10 70.5 58 62.1
Gohir.D13G025600 Gossypium hirsutum HOM05D000891 ORTHO05D011021 1.3e-10 70.5 58 62.1
Gorai.013G028800 Gossypium raimondii HOM05D000891 ORTHO05D011021 1.3e-10 70.5 58 62.1
SalBow8G1993 Salvia bowleyana HOM05D000891 ORTHO05D000761 2.3e-10 69.7 112 34.8
AUR62017650 Chenopodium quinoa HOM05D000891 ORTHO05D011021 3.0e-10 69.3 97 41.2
Lsat_1_v5_gn_8_33421 Lactuca sativa HOM05D000891 ORTHO05D011021 3.0e-10 69.3 59 54.2
Zm00001eb259410 Zea mays HOM05D027950 ORTHO05D011021 3.9e-10 68.9 153 32.0
Aqoxy3G00024 Aquilegia oxysepala HOM05D000891 ORTHO05D011021 8.6e-10 67.8 61 50.8
DCAR_030407 Daucus carota HOM05D000891 ORTHO05D011021 8.6e-10 67.8 210 29.0
Medtr2g022860 Medicago truncatula HOM05D000891 ORTHO05D000761 1.5e-09 67.0 179 29.6
AUR62044184 Chenopodium quinoa HOM05D000891 ORTHO05D000761 3.3e-09 65.9 101 32.7
CSS0040738 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 4.3e-09 65.5 171 27.5
Gohir.A09G069200 Gossypium hirsutum HOM05D000891 ORTHO05D000761 5.6e-09 65.1 78 38.5
TWI77G0594 Tripterygium wilfordii HOM05D000891 ORTHO05D011021 7.3e-09 64.7 47 66.0
TPR.G7638 Trifolium pratense HOM05D000891 ORTHO05D000761 2.1e-08 63.2 142 31.0
Cpa.g.sc8.290 Carica papaya HOM05D000891 ORTHO05D011021 2.8e-08 62.8 48 64.6
Sed0009198 Sechium edule HOM05D000891 ORTHO05D011021 6.2e-08 61.6 58 55.2
Ca_00621_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 1.4e-07 60.5 136 30.1
C04p27830 Brassica napus HOM05D000891 ORTHO05D026225 1.8e-07 60.1 128 32.8
BolC4t24326H Brassica oleracea HOM05D000891 ORTHO05D026225 1.8e-07 60.1 128 32.8
Gohir.A11G271366 Gossypium hirsutum HOM05D000891 ORTHO05D011021 2.3e-07 59.7 126 35.7
BcaC02g10532 Brassica carinata HOM05D000134 ORTHO05D026225 5.2e-07 58.5 150 29.3
Cc09_g01890 Coffea canephora HOM05D000891 ORTHO05D000761 5.2e-07 58.5 129 26.4
HanXRQChr15g0482791 Helianthus annuus HOM05D000891 ORTHO05D000761 5.2e-07 58.5 181 26.5
CSS0036990 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 6.8e-07 58.2 182 25.8
Psat1g181920 Pisum sativum HOM05D000891 ORTHO05D000761 2.6e-06 56.2 206 22.8
arahy.Tifrunner.gnm1.ann1.B0BY4Q Arachis hypogaea HOM05D000891 ORTHO05D000761 4.4e-06 55.5 90 30.0
arahy.Tifrunner.gnm1.ann1.LDS0KH Arachis hypogaea HOM05D000891 ORTHO05D000761 4.4e-06 55.5 90 30.0
Nn1g07110 Nelumbo nucifera HOM05D000891 ORTHO05D000761 4.4e-06 55.5 77 33.8
CARHR074340 Cardamine hirsuta HOM05D000891 ORTHO05D000761 5.8e-06 55.1 100 30.0


User provided reference genes

Program Settings