Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0239600 Rhododendron simsii HOM05D005958 ORTHO05D007469 2.1e-79 298.9 145 100.0
Actinidia23873 Actinidia chinensis HOM05D005958 ORTHO05D007469 5.6e-32 141.4 177 48.6
Rhsim01G0239700 Rhododendron simsii HOM05D005958 ORTHO05D007469 2.1e-31 139.4 170 49.4
Actinidia34469 Actinidia chinensis HOM05D000314 ORTHO05D007469 5.3e-30 134.8 168 49.4
TAR357G0008 Trochodendron aralioides HOM05D005958 ORTHO05D007469 3.5e-18 95.5 157 38.9
COL.COLO4_11067 Corchorus olitorius HOM05D005958 ORTHO05D007469 1.3e-17 93.6 163 40.5
Thecc.09G354200 Theobroma cacao HOM05D005958 ORTHO05D007469 1.3e-17 93.6 162 40.7
Cfa017138 Carpinus fangiana HOM05D005958 ORTHO05D007469 8.7e-17 90.9 134 44.0
MBI15_g36987_MAGBIO Magnolia biondii HOM05D005958 ORTHO05D007469 8.7e-17 90.9 170 36.5
Ciclev10011458m.g Citrus clementina HOM05D005958 ORTHO05D007469 2.5e-16 89.4 149 36.2
DCAR_007350 Daucus carota HOM05D005958 ORTHO05D007469 9.7e-16 87.4 153 39.9
Haze_21057 Corylus avellana HOM05D005958 ORTHO05D007469 2.8e-15 85.9 151 39.7
Dinv12141 Davidia involucrata HOM05D005958 ORTHO05D007469 2.8e-15 85.9 152 38.8
HanXRQChr15g0463921 Helianthus annuus HOM05D005958 ORTHO05D007469 2.8e-15 85.9 165 37.0
TAR369G0426 Trochodendron aralioides HOM05D005958 ORTHO05D007469 4.8e-15 85.1 162 37.7
ECA247G0460 Erigeron canadensis HOM05D005958 ORTHO05D007469 1.1e-14 84.0 150 37.3
RcHm_v2.0_Chr3g0462231 Rosa chinensis HOM05D005958 ORTHO05D007469 1.4e-14 83.6 156 37.2
CSS0015840 Camellia sinensis var. sinensis HOM05D005958 ORTHO05D007469 1.8e-14 83.2 171 35.1
CSS0028387 Camellia sinensis var. sinensis HOM05D005958 ORTHO05D007469 1.8e-14 83.2 171 35.1
Duzib150G1675 Durio zibethinus HOM05D005958 ORTHO05D007469 3.1e-14 82.4 157 36.3
ECA247G2256 Erigeron canadensis HOM05D005958 ORTHO05D007469 4.1e-14 82.0 166 34.9
Potri.009G075500 Populus trichocarpa HOM05D005958 ORTHO05D007469 4.1e-14 82.0 170 32.4
Glyma.03G050800 Glycine max HOM05D005958 ORTHO05D007469 6.9e-14 81.3 151 36.4
VMungo1383G1981 Vigna mungo HOM05D005958 ORTHO05D007469 6.9e-14 81.3 165 33.9
CSS0033178 Camellia sinensis var. sinensis HOM05D005958 ORTHO05D007469 9.0e-14 80.9 162 35.8
FAN05G4888 Fragaria x ananassa HOM05D005958 ORTHO05D007469 9.0e-14 80.9 174 32.8
PSO801G0039 Papaver somniferum HOM05D005958 ORTHO05D007469 9.0e-14 80.9 157 35.0
RcHm_v2.0_Chr3g0462211 Rosa chinensis HOM05D005958 ORTHO05D007469 1.5e-13 80.1 162 35.2
Actinidia29080 Actinidia chinensis HOM05D005958 ORTHO05D007469 2.0e-13 79.7 172 34.9
FAN05G1422 Fragaria x ananassa HOM05D005958 ORTHO05D007469 2.0e-13 79.7 176 32.4
Duzib093G1771 Durio zibethinus HOM05D005958 ORTHO05D007469 2.6e-13 79.3 154 35.7
HanXRQChr10g0287091 Helianthus annuus HOM05D005958 ORTHO05D007469 2.6e-13 79.3 149 36.9
Manes.02G212600 Manihot esculenta HOM05D005958 ORTHO05D007469 2.6e-13 79.3 165 32.7
Actinidia20755 Actinidia chinensis HOM05D005958 ORTHO05D007469 3.4e-13 79.0 164 36.0
ECA247G1750 Erigeron canadensis HOM05D005958 ORTHO05D007469 3.4e-13 79.0 149 35.6
Gohir.D08G219600 Gossypium hirsutum HOM05D005958 ORTHO05D007469 3.4e-13 79.0 172 35.5
FAN02G3855 Fragaria x ananassa HOM05D005958 ORTHO05D007469 4.5e-13 78.6 176 31.8
FAN05G3596 Fragaria x ananassa HOM05D005958 ORTHO05D007469 4.5e-13 78.6 176 31.8
Gohir.A08G202600 Gossypium hirsutum HOM05D005958 ORTHO05D007469 4.5e-13 78.6 172 35.5
Gorai.004G233600 Gossypium raimondii HOM05D005958 ORTHO05D007469 4.5e-13 78.6 165 34.5
FvH4_6g10940 Fragaria vesca HOM05D005958 ORTHO05D007469 7.7e-13 77.8 176 31.8
FAN05G5785 Fragaria x ananassa HOM05D005958 ORTHO05D007469 7.7e-13 77.8 158 35.4
FAN14G5414 Fragaria x ananassa HOM05D005958 ORTHO05D007469 7.7e-13 77.8 176 31.8
Prupe.6G282800 Prunus persica HOM05D005958 ORTHO05D007469 7.7e-13 77.8 177 32.2
Aqoxy2G00814 Aquilegia oxysepala HOM05D005958 ORTHO05D007469 1.0e-12 77.4 156 35.3
Medtr7g069740 Medicago truncatula HOM05D005958 ORTHO05D007469 1.0e-12 77.4 169 34.3
CSS0015551 Camellia sinensis var. sinensis HOM05D005958 ORTHO05D007469 1.3e-12 77.0 160 33.8
FAN02G1060 Fragaria x ananassa HOM05D005958 ORTHO05D007469 1.7e-12 76.6 158 35.4
Nitab4.5_0010796g0010 Nicotiana tabacum HOM05D005958 ORTHO05D007469 1.7e-12 76.6 161 34.2
PGR031G2865 Punica granatum HOM05D005958 ORTHO05D007469 1.7e-12 76.6 161 36.0
HanXRQChr04g0105851 Helianthus annuus HOM05D005958 ORTHO05D007469 2.2e-12 76.3 161 34.8
Manes.08G095500 Manihot esculenta HOM05D005958 ORTHO05D007469 2.2e-12 76.3 152 34.9
TWI77G0187 Tripterygium wilfordii HOM05D005958 ORTHO05D007469 2.2e-12 76.3 151 33.1
Actinidia29082 Actinidia chinensis HOM05D005958 ORTHO05D007469 3.8e-12 75.5 160 33.8
Cc06_g00940 Coffea canephora HOM05D005958 ORTHO05D007469 3.8e-12 75.5 173 34.1
COL.COLO4_14482 Corchorus olitorius HOM05D005958 ORTHO05D007469 3.8e-12 75.5 161 34.2
Dinv08434 Davidia involucrata HOM05D005958 ORTHO05D007469 5.0e-12 75.1 149 36.2
Manes.09G109800 Manihot esculenta HOM05D005958 ORTHO05D007469 5.0e-12 75.1 150 35.3
Psat3g124280 Pisum sativum HOM05D005958 ORTHO05D007469 5.0e-12 75.1 159 35.8
FvH4_6g10950 Fragaria vesca HOM05D005958 ORTHO05D007469 6.5e-12 74.7 157 35.0
FAN09G0235 Fragaria x ananassa HOM05D005958 ORTHO05D007469 6.5e-12 74.7 158 34.8
FAN09G1941 Fragaria x ananassa HOM05D005958 ORTHO05D007469 6.5e-12 74.7 171 32.2
HanXRQChr10g0291521 Helianthus annuus HOM05D005958 ORTHO05D007469 6.5e-12 74.7 164 36.0
Actinidia29081 Actinidia chinensis HOM05D005958 ORTHO05D007469 8.5e-12 74.3 157 35.0
Dinv04446 Davidia involucrata HOM05D005958 ORTHO05D007469 8.5e-12 74.3 149 35.6
Glyma.07G154300 Glycine max HOM05D005958 ORTHO05D007469 8.5e-12 74.3 149 35.6
MD12G1177000 Malus domestica HOM05D005958 ORTHO05D007469 8.5e-12 74.3 165 32.7
Lj1g0001035 Lotus japonicus HOM05D005958 ORTHO05D007469 1.1e-11 73.9 170 33.5
Dinv08437 Davidia involucrata HOM05D005958 ORTHO05D007469 1.4e-11 73.6 149 35.6
Lsat_1_v5_gn_9_37400 Lactuca sativa HOM05D005958 ORTHO05D007469 1.4e-11 73.6 155 34.2
TPR.G21328 Trifolium pratense HOM05D005958 ORTHO05D007469 1.4e-11 73.6 159 35.8
Glyma.18G205100 Glycine max HOM05D005958 ORTHO05D007469 2.5e-11 72.8 155 34.8
Phvul.008G094400 Phaseolus vulgaris HOM05D005958 ORTHO05D007469 3.2e-11 72.4 152 34.9
PGSC0003DMG400026643 Solanum tuberosum HOM05D005958 ORTHO05D007469 3.2e-11 72.4 172 32.6
Ca_07677_v3 Cicer arietinum L. HOM05D005958 ORTHO05D007469 4.2e-11 72.0 176 33.0
MD04G1163300 Malus domestica HOM05D005958 ORTHO05D007469 4.2e-11 72.0 166 31.3
MD12G1177200 Malus domestica HOM05D005958 ORTHO05D007469 4.2e-11 72.0 171 32.2
Thecc.05G009300 Theobroma cacao HOM05D005958 ORTHO05D007469 4.2e-11 72.0 151 33.8
Lsat_1_v5_gn_9_37420 Lactuca sativa HOM05D005958 ORTHO05D007469 5.5e-11 71.6 166 33.1
Actinidia11559 Actinidia chinensis HOM05D000026 ORTHO05D000094 7.2e-11 71.2 159 33.3
ECA247G0388 Erigeron canadensis HOM05D005958 ORTHO05D007469 7.2e-11 71.2 166 31.9
TWI74G1578 Tripterygium wilfordii HOM05D005958 ORTHO05D007469 7.2e-11 71.2 163 34.4
TWI77G0943 Tripterygium wilfordii HOM05D005958 ORTHO05D007469 7.2e-11 71.2 163 34.4
MD12G1176900 Malus domestica HOM05D005958 ORTHO05D007469 9.4e-11 70.9 171 31.0
Manes.08G095400 Manihot esculenta HOM05D005958 ORTHO05D007469 9.4e-11 70.9 166 27.7
Solyc09g018460.1 Solanum lycopersicum HOM05D005958 ORTHO05D007469 9.4e-11 70.9 156 32.7
Gorai.006G184400 Gossypium raimondii HOM05D005958 ORTHO05D007469 1.2e-10 70.5 153 33.3
DCAR_024004 Daucus carota HOM05D005958 ORTHO05D007469 2.1e-10 69.7 149 34.9
Gorai.012G118000 Gossypium raimondii HOM05D005958 ORTHO05D007469 2.7e-10 69.3 158 30.4
Lsat_1_v5_gn_9_37360 Lactuca sativa HOM05D005958 ORTHO05D007469 2.7e-10 69.3 155 32.9
Sopen09g011650 Solanum pennellii HOM05D005958 ORTHO05D007469 2.7e-10 69.3 160 33.1
Lsat_1_v5_gn_8_102760 Lactuca sativa HOM05D005958 ORTHO05D007469 3.6e-10 68.9 145 35.2
MD04G1163400 Malus domestica HOM05D005958 ORTHO05D007469 3.6e-10 68.9 157 34.4
Nitab4.5_0000230g0040 Nicotiana tabacum HOM05D005958 ORTHO05D007469 4.6e-10 68.6 160 32.5
Cc06_g00950 Coffea canephora HOM05D005958 ORTHO05D007469 7.9e-10 67.8 165 32.7
Gohir.A09G166900 Gossypium hirsutum HOM05D005958 ORTHO05D007469 7.9e-10 67.8 153 32.7
Gohir.D09G162800 Gossypium hirsutum HOM05D005958 ORTHO05D007469 7.9e-10 67.8 153 32.7
PGR004G1314 Punica granatum HOM05D005958 ORTHO05D007469 7.9e-10 67.8 159 31.4
Atru.chr3.4148 Acer truncatum HOM05D005958 ORTHO05D007469 1.4e-09 67.0 159 35.2
Lsat_1_v5_gn_9_37380 Lactuca sativa HOM05D005958 ORTHO05D007469 1.4e-09 67.0 155 32.9
Gohir.A04G094800 Gossypium hirsutum HOM05D005958 ORTHO05D007469 1.8e-09 66.6 158 29.7
CANSAT35G2009 Cannabis sativa HOM05D005958 ORTHO05D007469 3.9e-09 65.5 132 36.4
Potri.016G122500 Populus trichocarpa HOM05D005958 ORTHO05D007469 5.1e-09 65.1 163 31.3
CAN.G456.8 Capsicum annuum HOM05D005958 ORTHO05D007469 6.7e-09 64.7 161 31.1
Oeu038745.1 Olea europaea HOM05D005958 ORTHO05D007469 1.5e-08 63.5 153 34.0
DCAR_028875 Daucus carota HOM05D005958 ORTHO05D007469 2.5e-08 62.8 151 30.5
SalBow4G2317 Salvia bowleyana HOM05D005958 ORTHO05D007469 1.3e-07 60.5 155 29.0
SalBow4G2100 Salvia bowleyana HOM05D005958 ORTHO05D007469 1.7e-07 60.1 155 29.0
Gohir.D04G134450 Gossypium hirsutum HOM05D005958 ORTHO05D007469 8.2e-07 57.8 145 29.7
Eucgr.A00605 Eucalyptus grandis HOM05D005958 ORTHO05D007469 1.4e-06 57.0 158 29.7
Oeu042662.1 Olea europaea HOM05D005958 ORTHO05D007469 1.8e-06 56.6 169 29.0


User provided reference genes

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