Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 4.4e-109 397.9 191 100.0
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 1.1e-64 250.4 187 66.3
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 5.6e-64 248.1 188 68.6
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 4.6e-58 228.4 188 61.2
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 3.1e-46 189.1 194 54.6
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 1.3e-44 183.7 186 52.7
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 2.2e-44 183.0 184 51.6
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 1.9e-40 169.9 160 52.5
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 5.7e-40 168.3 209 47.8
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 2.8e-39 166.0 187 50.3
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 3.1e-38 162.5 187 50.3
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 2.0e-37 159.8 186 50.0
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 2.6e-37 159.5 187 48.7
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 5.5e-35 151.8 238 40.8
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 9.4e-35 151.0 190 45.8
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 1.0e-33 147.5 186 46.8
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 3.0e-33 146.0 187 47.6
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 3.0e-33 146.0 202 45.0
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 3.3e-32 142.5 187 44.4
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 9.7e-32 141.0 191 46.6
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 1.3e-31 140.6 189 45.5
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 1.3e-31 140.6 195 47.2
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 1.3e-31 140.6 216 44.0
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.1e-30 137.5 197 43.7
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 4.1e-30 135.6 200 44.0
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 2.6e-29 132.9 210 40.5
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 7.7e-29 131.3 190 44.2
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 1.0e-28 131.0 186 43.0
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 2.2e-28 129.8 195 42.6
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 3.8e-28 129.0 196 42.9
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 1.4e-27 127.1 188 44.7
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 3.2e-27 125.9 193 42.5
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 1.2e-26 124.0 196 41.8
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 1.6e-26 123.6 194 43.8
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 1.6e-26 123.6 189 41.8
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 2.7e-26 122.9 208 38.9
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 1.8e-25 120.2 196 40.8
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 1.8e-25 120.2 179 43.6
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 1.8e-25 120.2 192 42.2
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 8.8e-25 117.9 198 41.4
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 3.3e-24 115.9 198 40.9
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 5.7e-24 115.2 196 39.8
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 7.4e-24 114.8 196 39.8
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 1.6e-21 107.1 192 39.1
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 2.0e-21 106.7 182 41.2
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 3.8e-20 102.4 215 34.4
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 6.5e-20 101.7 189 40.7
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 6.7e-17 91.7 193 37.8
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 1.2e-16 90.9 198 35.9
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 2.0e-16 90.1 186 37.6
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 2.6e-16 89.7 65 67.7
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 3.3e-16 89.4 190 37.4
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 5.7e-16 88.6 190 37.4
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 9.7e-16 87.8 198 35.4
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.3e-15 87.4 186 36.0
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 1.7e-15 87.0 186 36.6
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 1.7e-15 87.0 186 36.6
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 8.2e-15 84.7 186 34.4
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 1.4e-14 84.0 189 33.9
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 2.4e-14 83.2 192 35.4
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 7.0e-14 81.6 187 35.8
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 7.0e-14 81.6 187 36.4
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 9.1e-14 81.3 187 36.4
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 9.1e-14 81.3 192 36.5
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 1.7e-12 77.0 194 32.5
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 5.5e-11 72.0 108 41.7
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 2.1e-10 70.1 178 32.0
Aqoxy1G02236 Aquilegia oxysepala HOM05D007739 ORTHO05D009838 4.7e-10 68.9 131 34.4
BraA01t03991Z Brassica rapa HOM05D007739 ORTHO05D009838 6.1e-10 68.6 178 32.0
Nn7g36303 Nelumbo nucifera HOM05D007739 ORTHO05D009838 1.7e-07 60.5 60 58.3
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.7e-07 60.5 201 30.8
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 2.2e-07 60.1 178 32.0
Eucgr.J00706 Eucalyptus grandis HOM05D007739 ORTHO05D009838 6.3e-07 58.5 63 52.4
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.1e-06 57.8 143 32.2
Nn7g36621 Nelumbo nucifera HOM05D007739 ORTHO05D009838 1.8e-06 57.0 118 38.1


User provided reference genes

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