Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0179000 Rhododendron simsii HOM05D008433 ORTHO05D009918 3.6e-90 335.1 196 100.0
CSS0049417 Camellia sinensis var. sinensis HOM05D008433 ORTHO05D009918 2.7e-21 106.3 196 41.8
Actinidia28092 Actinidia chinensis HOM05D013717 ORTHO05D009918 6.0e-21 105.1 196 39.3
Ah.05g179030 Amaranthus hybridus HOM05D008433 ORTHO05D009918 3.6e-13 79.3 203 35.0
Cfa004661 Carpinus fangiana HOM05D008433 ORTHO05D009918 1.4e-12 77.4 138 39.1
Nitab4.5_0002053g0010 Nicotiana tabacum HOM05D018587 ORTHO05D009918 5.7e-11 72.0 196 35.2
Oeu046652.1 Olea europaea HOM05D008433 ORTHO05D009918 5.7e-11 72.0 124 37.9
AUR62004552 Chenopodium quinoa HOM05D008433 ORTHO05D009918 9.7e-11 71.2 172 31.4
AUR62022666 Chenopodium quinoa HOM05D008433 ORTHO05D009918 9.7e-11 71.2 193 32.1
Hma1.2p1_1697F.1_g298100 Hydrangea macrophylla HOM05D008433 ORTHO05D009918 1.3e-10 70.9 177 40.1
Thecc.01G334700 Theobroma cacao HOM05D008433 ORTHO05D009918 1.4e-09 67.4 111 37.8
Prupe.2G196100 Prunus persica HOM05D013717 ORTHO05D009918 2.4e-09 66.6 200 33.5
CiPaw.01G081400 Carya illinoinensis HOM05D008433 ORTHO05D009918 3.1e-09 66.2 197 37.1
Lj1g0005818 Lotus japonicus HOM05D008433 ORTHO05D009918 3.1e-09 66.2 80 46.2
TWI14G1180 Tripterygium wilfordii HOM05D008433 ORTHO05D009918 4.1e-09 65.9 127 34.6
Duzib138G0947 Durio zibethinus HOM05D008433 ORTHO05D009918 5.3e-09 65.5 111 39.6
Nitab4.5_0003094g0050 Nicotiana tabacum HOM05D018587 ORTHO05D009918 5.3e-09 65.5 210 32.4
Oeu015062.1 Olea europaea HOM05D008433 ORTHO05D009918 5.3e-09 65.5 98 40.8
Potri.002G178100 Populus trichocarpa HOM05D008433 ORTHO05D009918 7.7e-08 61.6 102 44.1
PGSC0003DMG400010820 Solanum tuberosum HOM05D018587 ORTHO05D009918 2.2e-07 60.1 99 36.4
FAN03G0231 Fragaria x ananassa HOM05D013717 ORTHO05D009918 2.9e-07 59.7 195 30.3
A04p34600 Brassica napus HOM05D008433 ORTHO05D009918 6.5e-07 58.5 142 31.7
BraA04t18918Z Brassica rapa HOM05D008433 ORTHO05D009918 6.5e-07 58.5 142 31.7
Thhalv10001667m.g Eutrema salsugineum HOM05D008433 ORTHO05D009918 8.5e-07 58.2 93 39.8
FAN10G3789 Fragaria x ananassa HOM05D013717 ORTHO05D009918 8.5e-07 58.2 194 29.9
Sed0019953 Sechium edule HOM05D029570 ORTHO05D009918 8.5e-07 58.2 192 32.3
ClCG06G002750 Citrullus lanatus HOM05D029570 ORTHO05D009918 1.4e-06 57.4 200 33.5
FAN06G2608 Fragaria x ananassa HOM05D013717 ORTHO05D009918 1.4e-06 57.4 194 31.4
MBI12_g42093_MAGBIO Magnolia biondii HOM05D008433 ORTHO05D009918 2.5e-06 56.6 131 29.8
BcaNung03892 Brassica carinata HOM05D008433 ORTHO05D009918 3.2e-06 56.2 86 41.9
Cpa.g.sc141.14 Carica papaya HOM05D008433 ORTHO05D009918 4.2e-06 55.8 118 34.7
Sc26g0000460 Simmondsia chinensis HOM05D008433 ORTHO05D009918 4.2e-06 55.8 103 35.0
Aa31LG1G28120 Aethionema arabicum HOM05D008433 ORTHO05D009918 5.5e-06 55.5 81 40.7
BcaC02g07007 Brassica carinata HOM05D008433 ORTHO05D009918 5.5e-06 55.5 142 30.3
C04p72390 Brassica napus HOM05D008433 ORTHO05D009918 5.5e-06 55.5 142 30.3
BolC4t28725H Brassica oleracea HOM05D008433 ORTHO05D009918 5.5e-06 55.5 142 30.3
FAN10G3359 Fragaria x ananassa HOM05D013717 ORTHO05D009918 5.5e-06 55.5 194 30.9
Glyma.19G259100 Glycine max HOM05D008433 ORTHO05D009918 5.5e-06 55.5 111 40.5
ATR0579G055 Amborella trichopoda HOM05D032616 ORTHO05D031091 7.2e-06 55.1 158 34.2
TPR.G22611 Trifolium pratense HOM05D008433 ORTHO05D009918 7.2e-06 55.1 78 38.5
VMungo1309G0842 Vigna mungo HOM05D008433 ORTHO05D009918 7.2e-06 55.1 82 41.5
TAR629G1417 Trochodendron aralioides HOM05D008433 ORTHO05D009918 9.4e-06 54.7 195 34.4


User provided reference genes

Program Settings