Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0178600 Rhododendron simsii HOM05D007943 ORTHO05D010047 6.2e-79 297.4 146 100.0
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 9.7e-16 87.4 88 51.1
CSS0001750 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 7.7e-13 77.8 82 50.0
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 2.5e-11 72.8 82 46.3
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 2.5e-11 72.8 80 45.0
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 7.2e-11 71.2 86 45.3
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 9.4e-11 70.9 85 44.7
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 1.6e-10 70.1 86 45.3
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.6e-10 70.1 86 45.3
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.6e-10 70.1 86 45.3
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 1.6e-10 70.1 98 38.8
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 2.1e-10 69.7 89 43.8
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 3.6e-10 68.9 91 45.1
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 3.6e-10 68.9 90 43.3
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 6.1e-10 68.2 86 44.2
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 8.0e-10 67.8 90 44.4
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 8.0e-10 67.8 86 43.0
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 8.0e-10 67.8 75 45.3
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 8.0e-10 67.8 75 45.3
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 1.4e-09 67.0 75 46.7
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 2.3e-09 66.2 90 44.4
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 5.2e-09 65.1 75 42.7
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 6.7e-09 64.7 70 50.0
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 6.7e-09 64.7 82 46.3
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 6.7e-09 64.7 88 44.3
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 8.8e-09 64.3 78 47.4
Nn3g18838 Nelumbo nucifera HOM05D007943 ORTHO05D010047 8.8e-09 64.3 82 39.0
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 8.8e-09 64.3 77 45.5
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 4.4e-08 62.0 76 43.4
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 4.4e-08 62.0 77 48.1
TAR375G0647 Trochodendron aralioides HOM05D007943 ORTHO05D010047 9.7e-08 60.8 67 49.3
COL.COLO4_06217 Corchorus olitorius HOM05D007943 ORTHO05D010047 1.3e-07 60.5 83 42.2
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 1.3e-07 60.5 62 50.0
Hund16743 Selenicereus undatus HOM05D007943 ORTHO05D010047 1.7e-07 60.1 76 40.8
AUR62004549 Chenopodium quinoa HOM05D007943 ORTHO05D010047 2.2e-07 59.7 79 41.8
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 3.7e-07 58.9 91 41.8
Sc23g0001870 Simmondsia chinensis HOM05D007943 ORTHO05D010047 4.8e-07 58.5 77 39.0
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 4.8e-07 58.5 89 41.6
Lj3g0013373 Lotus japonicus HOM05D007943 ORTHO05D010047 6.3e-07 58.2 73 43.8
DCAR_006654 Daucus carota HOM05D007943 ORTHO05D010047 1.1e-06 57.4 61 47.5
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.1e-06 57.4 79 39.2
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 1.1e-06 57.4 79 39.2
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 1.1e-06 57.4 58 51.7
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 1.4e-06 57.0 71 43.7
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.8e-06 56.6 79 39.2
AL1G11360 Arabidopsis lyrata HOM05D007943 ORTHO05D010047 3.1e-06 55.8 54 46.3
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 3.1e-06 55.8 82 39.0
Solyc10g009260.1 Solanum lycopersicum HOM05D007943 ORTHO05D010047 3.1e-06 55.8 65 43.1
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 5.3e-06 55.1 86 37.2
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 5.3e-06 55.1 83 39.8
A09p68930 Brassica napus HOM05D007943 ORTHO05D010047 7.0e-06 54.7 78 41.0
BolC8t52866H Brassica oleracea HOM05D007943 ORTHO05D010047 7.0e-06 54.7 74 41.9
Carub.0001s0107 Capsella rubella HOM05D007943 ORTHO05D010047 7.0e-06 54.7 54 44.4
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 9.1e-06 54.3 83 38.6


User provided reference genes

Program Settings