Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0177900 Rhododendron simsii HOM05D000045 ORTHO05D010036 4.9e-111 404.4 200 100.0
Rhsim13G0132100 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.4e-75 284.3 235 66.8
Rhsim04G0171600 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.7e-67 257.3 233 59.2
Rhsim09G0033300 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-62 243.8 234 56.8
Rhsim13G0135200 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.7e-56 221.1 233 52.4
Rhsim05G0121500 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.5e-55 218.0 233 52.4
Rhsim07G0161600 Rhododendron simsii HOM05D000045 ORTHO05D010036 6.1e-53 211.5 233 49.8
Rhsim05G0228500 Rhododendron simsii HOM05D000045 ORTHO05D010036 8.0e-53 211.1 233 49.8
Rhsim07G0160800 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.0e-51 206.5 233 50.2
Rhsim05G0122000 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.6e-51 206.1 233 49.4
Rhsim03G0080800 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.5e-51 204.5 233 50.2
Rhsim05G0116800 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.5e-51 204.5 233 49.8
Rhsim07G0150300 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.3e-50 203.8 234 48.3
Rhsim07G0159000 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.7e-50 203.4 235 46.4
Rhsim11G0078300 Rhododendron simsii HOM05D000045 ORTHO05D011270 3.7e-50 202.2 201 58.7
Rhsim05G0139200 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.0e-49 198.0 233 48.1
Rhsim01G0177800 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.1e-49 197.6 233 47.6
Rhsim02G0163400 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.2e-48 197.2 233 48.1
Rhsim09G0160500 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.0e-48 196.4 236 46.6
Rhsim06G0086700 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.1e-45 186.4 235 43.0
Rhsim08G0163800 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.8e-45 186.0 217 47.5
Rhsim08G0163900 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.0e-44 184.1 231 44.6
Rhsim10G0159200 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.0e-44 184.1 243 44.0
RhsimUnG0089200 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.0e-44 184.1 219 48.4
Rhsim04G0102900 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.6e-43 179.5 212 47.2
Rhsim02G0137500 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.4e-43 179.1 218 47.7
Rhsim12G0090300 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.3e-42 177.2 193 53.4
Rhsim12G0095300 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.1e-41 174.1 243 42.8
Rhsim11G0003900 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.1e-41 172.2 235 42.6
Rhsim06G0110600 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.5e-40 169.1 234 43.6
Rhsim08G0146600 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.5e-38 161.0 223 40.8
Rhsim12G0117700 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.1e-37 159.8 171 51.5
Rhsim13G0127000 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.1e-37 158.3 223 41.3
Rhsim02G0171700 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.3e-36 156.4 222 40.5
Rhsim01G0113700 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.2e-35 154.1 222 40.5
Rhsim05G0048700 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.5e-35 153.7 222 41.0
Rhsim02G0178700 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.8e-35 151.8 218 41.7
RhsimUnG0122000 Rhododendron simsii HOM05D000045 ORTHO05D000009 6.4e-34 148.3 211 39.8
Rhsim10G0098100 Rhododendron simsii HOM05D000006 ORTHO05D010036 1.7e-31 140.2 199 42.2
Rhsim06G0088300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.3e-31 139.8 148 57.4
Rhsim09G0080800 Rhododendron simsii HOM05D000045 ORTHO05D011270 8.6e-31 137.9 98 76.5
RhsimUnG0116300 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-30 137.5 182 45.1
Rhsim09G0059900 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.2e-29 134.0 142 50.7
Rhsim04G0129100 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.8e-29 132.9 208 38.5
Rhsim01G0152900 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.3e-26 124.0 193 39.4
Rhsim10G0164100 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.7e-26 122.5 202 37.1
Ciclev10013881m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.1e-25 120.9 239 33.9
Rhsim09G0077400 Rhododendron simsii HOM05D000045 ORTHO05D010036 9.2e-25 117.9 175 40.6
FvH4_2g02512 Fragaria vesca HOM05D000045 ORTHO05D010036 1.6e-24 117.1 212 34.4
Atru.chr4.2343 Acer truncatum HOM05D000045 ORTHO05D000067 1.0e-23 114.4 237 31.2
Rhsim02G0126800 Rhododendron simsii HOM05D009480 ORTHO05D010036 1.0e-23 114.4 106 56.6
Rhsim02G0105500 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.3e-23 114.0 203 39.9
Atru.chr4.2354 Acer truncatum HOM05D000045 ORTHO05D000067 6.6e-23 111.7 237 30.8
FvH4_4g29541 Fragaria vesca HOM05D000045 ORTHO05D010036 4.3e-22 109.0 241 29.9
Ciclev10003378m.g Citrus clementina HOM05D000045 ORTHO05D010036 7.3e-22 108.2 237 32.5
Rhsim02G0184800 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.8e-21 106.3 176 36.4
TWI56G1493 Tripterygium wilfordii HOM05D000045 ORTHO05D010036 6.2e-21 105.1 232 31.5
Rhsim02G0163900 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.1e-21 104.8 156 39.1
Rhsim05G0115200 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.4e-20 104.0 145 41.4
Rhsim03G0118800 Rhododendron simsii HOM05D009480 ORTHO05D010036 1.8e-20 103.6 185 36.2
RhsimUnG0059000 Rhododendron simsii HOM05D000045 ORTHO05D010036 6.8e-20 101.7 186 36.6
Ciclev10030397m.g Citrus clementina HOM05D009480 ORTHO05D010036 3.4e-19 99.4 210 31.4
TWI38G0144 Tripterygium wilfordii HOM05D000045 ORTHO05D010036 1.7e-18 97.1 203 34.0
Rhsim08G0120600 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.1e-17 94.4 160 35.0
Aqoxy3G01610 Aquilegia oxysepala HOM05D000045 ORTHO05D010036 1.4e-17 94.0 233 27.9
FvH4_4g06321 Fragaria vesca HOM05D019783 ORTHO05D022550 1.4e-17 94.0 195 28.2
Rhsim03G0122300 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.1e-17 91.7 98 48.0
FvH4_6g21931 Fragaria vesca HOM05D000045 ORTHO05D000067 2.1e-16 90.1 215 27.0
Rhsim01G0160100 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.7e-16 89.7 162 34.6
Rhsim02G0156000 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.7e-16 89.7 100 47.0
Ciclev10030053m.g Citrus clementina HOM05D000045 ORTHO05D010036 4.6e-16 89.0 214 28.5
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 6.0e-16 88.6 251 27.5
FAN16G3729 Fragaria x ananassa HOM05D009480 ORTHO05D010036 6.0e-16 88.6 214 30.8
Rhsim01G0160300 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.8e-16 88.2 64 60.9
TWI31G1262 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.8e-16 88.2 205 32.7
Rhsim09G0160700 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.0e-15 86.3 178 34.3
FvH4_5g31093 Fragaria vesca HOM05D000045 ORTHO05D010036 1.1e-14 84.3 224 28.1
Oeu028875.1 Olea europaea HOM05D009480 ORTHO05D010036 9.5e-14 81.3 110 44.5
Rhsim09G0062000 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.2e-13 80.9 121 43.8
TWI38G1085 Tripterygium wilfordii HOM05D000045 ORTHO05D011270 6.2e-13 78.6 99 45.5
TWI15G0179 Tripterygium wilfordii HOM05D000045 ORTHO05D010036 1.2e-11 74.3 195 30.8
Rhsim09G0062800 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.6e-11 73.2 121 41.3
Rhsim02G0163800 Rhododendron simsii HOM05D009480 ORTHO05D010036 3.4e-11 72.8 49 71.4
FAN21G3715 Fragaria x ananassa HOM05D009480 ORTHO05D010036 1.7e-10 70.5 112 39.3
TWI09G0017 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.4e-09 67.4 95 36.8
TWI53G2134 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.4e-09 67.4 95 36.8
FAN01G0001 Fragaria x ananassa HOM05D009480 ORTHO05D010036 1.9e-09 67.0 111 36.9
Rhsim05G0179300 Rhododendron simsii HOM05D000045 ORTHO05D010036 4.1e-09 65.9 108 34.3
FvH4_4g27332 Fragaria vesca HOM05D017263 ORTHO05D020626 5.4e-09 65.5 221 28.1
Rhsim09G0092300 Rhododendron simsii HOM05D009480 ORTHO05D010036 5.4e-09 65.5 41 75.6
Hma1.2p1_0151F.1_g067480 Hydrangea macrophylla HOM05D009480 ORTHO05D010036 7.1e-09 65.1 120 35.0
Hund24534 Selenicereus undatus HOM05D000045 ORTHO05D000695 7.1e-09 65.1 236 25.8
SGA_v2.0_scaffold10G05309 Striga asiatica HOM05D011878 ORTHO05D011270 1.2e-08 64.3 181 28.7
Rhsim02G0101100 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.5e-08 62.8 80 45.0
Hund15210 Selenicereus undatus HOM05D000045 ORTHO05D000695 6.0e-08 62.0 237 26.2
Hund31175 Selenicereus undatus HOM05D000045 ORTHO05D000695 7.8e-08 61.6 236 25.0
FvH4_6g01982 Fragaria vesca HOM05D019783 ORTHO05D022550 1.0e-07 61.2 197 24.9
TWI36G1011 Tripterygium wilfordii HOM05D000045 ORTHO05D010036 1.0e-07 61.2 160 30.0
FAN15G1532 Fragaria x ananassa HOM05D009480 ORTHO05D010036 3.9e-07 59.3 204 28.4
Oeu060439.1 Olea europaea HOM05D009480 ORTHO05D010036 3.9e-07 59.3 81 40.7
Rhsim07G0205700 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.6e-07 58.5 199 26.6
Rhsim07G0206800 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.6e-07 58.5 199 26.6
GSVIVG01011502001 Vitis vinifera HOM05D000045 ORTHO05D000067 6.6e-07 58.5 114 37.7
FAN05G2750 Fragaria x ananassa HOM05D009480 ORTHO05D010036 1.5e-06 57.4 72 44.4
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 2.5e-06 56.6 236 23.3
SGA_v2.0_scaffold3G01819 Striga asiatica HOM05D011878 ORTHO05D011270 2.5e-06 56.6 224 25.4
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.3e-06 56.2 218 24.8
FAN21G3859 Fragaria x ananassa HOM05D009480 ORTHO05D010036 4.3e-06 55.8 74 45.9
Lj6g0017785 Lotus japonicus HOM05D000045 ORTHO05D000695 4.3e-06 55.8 231 23.4
Hund04370 Selenicereus undatus HOM05D000045 ORTHO05D000695 4.3e-06 55.8 190 25.3
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 5.6e-06 55.5 241 24.1
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 5.6e-06 55.5 241 24.1
SGA_v2.0_scaffold185G40051 Striga asiatica HOM05D011878 ORTHO05D011270 5.6e-06 55.5 109 39.4
FAN15G0711 Fragaria x ananassa HOM05D009480 ORTHO05D010036 7.3e-06 55.1 92 37.0
MBI11_g24615_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000067 7.3e-06 55.1 144 31.9


User provided reference genes

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