Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0168000 Rhododendron simsii HOM05D005133 ORTHO05D006685 1.6e-30 135.6 77 100.0
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 3.3e-23 111.3 71 88.7
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 7.4e-23 110.2 71 87.3
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.3e-22 109.4 73 86.3
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 2.1e-22 108.6 73 86.3
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 2.1e-22 108.6 73 84.9
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 3.7e-22 107.8 72 83.3
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 4.8e-22 107.5 71 84.5
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 8.2e-22 106.7 73 83.6
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 8.2e-22 106.7 73 80.8
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 1.1e-21 106.3 73 84.9
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.8e-21 105.5 73 82.2
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.8e-21 105.5 73 82.2
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 1.8e-21 105.5 71 85.9
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 1.8e-21 105.5 73 80.8
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 1.8e-21 105.5 73 82.2
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 1.8e-21 105.5 71 83.1
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 2.4e-21 105.1 73 80.8
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 2.4e-21 105.1 71 83.1
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 2.4e-21 105.1 71 83.1
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 2.4e-21 105.1 71 84.5
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 3.1e-21 104.8 71 81.7
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 4.1e-21 104.4 73 80.8
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 4.1e-21 104.4 71 84.5
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 5.3e-21 104.0 71 81.7
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 5.3e-21 104.0 71 81.7
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 5.3e-21 104.0 71 81.7
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 5.3e-21 104.0 73 80.8
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 6.9e-21 103.6 73 79.5
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 6.9e-21 103.6 73 79.5
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 6.9e-21 103.6 71 81.7
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 6.9e-21 103.6 71 81.7
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 9.0e-21 103.2 70 82.9
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 9.0e-21 103.2 73 79.5
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 1.2e-20 102.8 73 79.5
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.2e-20 102.8 71 81.7
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 1.2e-20 102.8 73 79.5
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.5e-20 102.4 71 81.7
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 1.5e-20 102.4 73 78.1
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 1.5e-20 102.4 73 80.8
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 1.5e-20 102.4 73 78.1
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 2.0e-20 102.1 71 81.7
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 2.0e-20 102.1 71 81.7
ECA234G4221 Erigeron canadensis HOM05D005133 ORTHO05D006685 2.6e-20 101.7 72 80.6
SalBow1G3823 Salvia bowleyana HOM05D005133 ORTHO05D006685 2.6e-20 101.7 73 79.5
SalBow3G2243 Salvia bowleyana HOM05D005133 ORTHO05D006685 2.6e-20 101.7 73 79.5
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 3.4e-20 101.3 72 80.6
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.4e-20 101.3 71 80.3
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 3.4e-20 101.3 71 80.3
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 3.4e-20 101.3 71 83.1
arahy.Tifrunner.gnm1.ann1.YZ0HQS Arachis hypogaea HOM05D005133 ORTHO05D006685 4.5e-20 100.9 71 81.7
DCAR_025229 Daucus carota HOM05D005133 ORTHO05D006685 4.5e-20 100.9 72 80.6
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 4.5e-20 100.9 73 78.1
Prupe.2G179100 Prunus persica HOM05D005133 ORTHO05D006685 7.6e-20 100.1 71 78.9
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 1.0e-19 99.8 73 78.1
MD07G1130200 Malus domestica HOM05D005133 ORTHO05D006685 1.3e-19 99.4 72 76.4
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 1.3e-19 99.4 71 77.5
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 1.3e-19 99.4 71 77.5
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 1.7e-19 99.0 73 78.1
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 1.7e-19 99.0 71 80.3
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 2.2e-19 98.6 73 78.1
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 2.2e-19 98.6 73 78.1
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 2.2e-19 98.6 73 78.1
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 2.9e-19 98.2 71 77.5
Sc01g0003150 Simmondsia chinensis HOM05D005133 ORTHO05D006685 3.8e-19 97.8 72 75.0
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 5.0e-19 97.4 73 76.7
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 5.0e-19 97.4 73 78.1
Lalb_Chr19g0138411 Lupinus albus HOM05D005133 ORTHO05D006685 6.5e-19 97.1 73 75.3
ATR0626G352 Amborella trichopoda HOM05D005133 ORTHO05D006685 8.5e-19 96.7 73 76.7
Os01g0226500 Oryza sativa ssp. japonica HOM05D005133 ORTHO05D006685 1.4e-18 95.9 73 72.6
vmacro20884 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 1.4e-18 95.9 90 68.9
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 3.2e-18 94.7 71 77.5
PSO478G1127 Papaver somniferum HOM05D005133 ORTHO05D006685 3.2e-18 94.7 73 75.3
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 3.2e-18 94.7 65 78.5
Zm00001eb339090 Zea mays HOM05D005133 ORTHO05D006685 3.2e-18 94.7 71 74.6
HanXRQChr17g0562291 Helianthus annuus HOM05D005133 ORTHO05D006685 4.2e-18 94.4 70 75.7
AUR62004420 Chenopodium quinoa HOM05D005133 ORTHO05D006685 7.2e-18 93.6 72 75.0
FAN10G2939 Fragaria x ananassa HOM05D005133 ORTHO05D006685 9.3e-18 93.2 71 71.8
Nn7g37315 Nelumbo nucifera HOM05D005133 ORTHO05D006685 1.2e-17 92.8 73 71.2
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 1.6e-17 92.4 89 65.2
Hund27238 Selenicereus undatus HOM05D005133 ORTHO05D006685 2.7e-17 91.7 85 68.2
FAN10G2725 Fragaria x ananassa HOM05D005133 ORTHO05D006685 4.6e-17 90.9 71 70.4
Lsat_1_v5_gn_4_34900 Lactuca sativa HOM05D005133 ORTHO05D006685 6.1e-17 90.5 69 73.9
PGR031G0061 Punica granatum HOM05D005133 ORTHO05D006685 6.1e-17 90.5 71 76.1
EL10Ac1g00344 Beta vulgaris HOM05D005133 ORTHO05D006685 7.9e-17 90.1 72 73.6
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 1.0e-16 89.7 105 59.0
FvH4_7g15540 Fragaria vesca HOM05D005133 ORTHO05D006685 2.3e-16 88.6 70 70.0
FAN06G1776 Fragaria x ananassa HOM05D005133 ORTHO05D006685 2.3e-16 88.6 70 70.0
TWI34G1432 Tripterygium wilfordii HOM05D005133 ORTHO05D006685 2.3e-16 88.6 71 76.1
CDE09G0708 Ceratophyllum demersum HOM05D005133 ORTHO05D006685 3.9e-16 87.8 71 74.6
MBI16_g41624_MAGBIO Magnolia biondii HOM05D005133 ORTHO05D006685 6.3e-14 80.5 93 58.1
Rhsim01G0167900 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.8e-13 79.0 42 100.0
FAN06G1340 Fragaria x ananassa HOM05D005133 ORTHO05D006685 1.0e-11 73.2 80 57.5
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 1.0e-11 73.2 71 62.0
BcaC02g12707 Brassica carinata HOM05D005133 ORTHO05D006685 1.7e-11 72.4 72 54.2
Aa31LG1G27580 Aethionema arabicum HOM05D005133 ORTHO05D006685 3.8e-11 71.2 57 66.7
AL4G45460 Arabidopsis lyrata HOM05D005133 ORTHO05D006685 5.0e-11 70.9 65 60.0
Haze_15576 Corylus avellana HOM05D005133 ORTHO05D006685 5.0e-11 70.9 47 80.9
Eucgr.J01063 Eucalyptus grandis HOM05D005133 ORTHO05D006685 5.0e-11 70.9 49 77.6
SMO239G0112 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 5.0e-11 70.9 70 60.0
AT2G46200 Arabidopsis thaliana HOM05D005133 ORTHO05D006685 6.5e-11 70.5 65 58.5
Sp5g32810 Schrenkiella parvula HOM05D005133 ORTHO05D006685 6.5e-11 70.5 65 58.5
Thhalv10001493m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 8.5e-11 70.1 65 58.5
Pp3c4_26280 Physcomitrium patens HOM05D005133 ORTHO05D006685 1.1e-10 69.7 72 56.9
THA.LOC104817324 Tarenaya hassleriana HOM05D005133 ORTHO05D006685 1.1e-10 69.7 71 57.7
CARHR141470 Cardamine hirsuta HOM05D005133 ORTHO05D006685 1.4e-10 69.3 74 55.4
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 1.4e-10 69.3 49 77.6
vmacro22850 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 1.9e-10 68.9 73 64.4
BcaC02g12500 Brassica carinata HOM05D005133 ORTHO05D006685 2.5e-10 68.6 63 58.7
Carub.0004s2888 Capsella rubella HOM05D005133 ORTHO05D006685 3.2e-10 68.2 63 57.1
A05p01630 Brassica napus HOM05D005133 ORTHO05D006685 5.5e-10 67.4 65 55.4
BraA05t19159Z Brassica rapa HOM05D005133 ORTHO05D006685 5.5e-10 67.4 65 55.4
Haze_15581 Corylus avellana HOM05D005133 ORTHO05D006685 5.5e-10 67.4 65 61.5
Thhalv10028732m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 7.2e-10 67.0 65 56.9
C04p01840 Brassica napus HOM05D005133 ORTHO05D006685 9.4e-10 66.6 63 57.1
AagrBONN_evm.TU.Sc2ySwM_344.4499 Anthoceros agrestis HOM05D005133 ORTHO05D006685 2.1e-09 65.5 68 57.4
CAN.G78.137 Capsicum annuum HOM05D005133 ORTHO05D006685 2.7e-09 65.1 51 70.6
vmacro13220 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 7.9e-09 63.5 73 61.6
SMO117G0103 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 3.0e-08 61.6 49 69.4
Mapoly0001s0322 Marchantia polymorpha HOM05D005133 ORTHO05D006685 5.1e-08 60.8 74 47.3
SMO114G0022 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 2.6e-07 58.5 63 55.6
FvH4_2g33570 Fragaria vesca HOM05D000073 ORTHO05D015767 3.3e-07 58.2 50 62.0


User provided reference genes

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