Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0163900 Rhododendron simsii HOM05D010927 ORTHO05D000004 5.1e-93 344.4 169 100.0
RhsimUnG0204100 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.5e-17 92.4 75 58.7
Rhsim07G0158700 Rhododendron simsii HOM05D010927 ORTHO05D000004 1.0e-16 90.9 75 60.0
vmacro20784 Vaccinium macrocarpon HOM05D010927 ORTHO05D000004 3.9e-16 89.0 142 43.7
Rhsim01G0162300 Rhododendron simsii HOM05D010927 ORTHO05D000004 3.3e-15 85.9 54 74.1
vmacro02975 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.8e-14 82.8 120 39.2
RhsimUnG0218600 Rhododendron simsii HOM05D010927 ORTHO05D000004 3.6e-14 82.4 72 58.3
Oeu045954.1 Olea europaea HOM05D000003 ORTHO05D000004 4.0e-13 79.0 159 28.9
MBI13_g00705_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.9e-12 74.3 163 27.6
Cpa.g.sc31.68 Carica papaya HOM05D000003 ORTHO05D000004 1.3e-11 73.9 98 37.8
Oeu032320.1 Olea europaea HOM05D000003 ORTHO05D000004 8.3e-11 71.2 153 28.1
Actinidia03486 Actinidia chinensis HOM05D000028 ORTHO05D000296 1.1e-10 70.9 103 37.9
PSO541G5183 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-10 70.9 95 37.9
Aqoxy3G02928 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.4e-10 70.5 100 35.0
PSO421G0192 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-10 70.5 86 38.4
PSO675G7901 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-10 70.1 153 27.5
Aqoxy2G01460 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.4e-10 69.7 101 33.7
Ah.06g185410 Amaranthus hybridus HOM05D000003 ORTHO05D000004 5.4e-10 68.6 166 29.5
Rhsim02G0101400 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.4e-10 68.6 91 33.0
Rhsim11G0018500 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.1e-10 68.2 100 35.0
MBI05_g11580_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.2e-10 67.8 104 36.5
PSO339G6617 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-09 67.4 92 38.0
PSO832G4384 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-09 67.4 106 34.9
Aqoxy4G01140 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.6e-09 67.0 96 38.5
CSS0031349 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-09 67.0 104 33.7
Aqoxy2G01404 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.1e-09 66.6 101 31.7
PSO170G3817 Papaver somniferum HOM05D000003 ORTHO05D000004 2.7e-09 66.2 102 33.3
Rhsim07G0053500 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-09 66.2 65 52.3
Hund02994 Selenicereus undatus HOM05D000003 ORTHO05D000004 2.7e-09 66.2 97 34.0
Rhsim02G0189800 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.5e-09 65.9 54 59.3
Hund22312 Selenicereus undatus HOM05D000003 ORTHO05D000004 3.5e-09 65.9 97 34.0
Aqoxy1G00096 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.6e-09 65.5 100 34.0
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-09 65.5 93 35.5
MBI10_g16721_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.0e-09 65.1 103 30.1
PSO782G0894 Papaver somniferum HOM05D000003 ORTHO05D000004 6.0e-09 65.1 89 34.8
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 6.0e-09 65.1 93 34.4
QL09p039576 Quercus lobata HOM05D000003 ORTHO05D000004 7.8e-09 64.7 92 34.8
PGSC0003DMG400009750 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.8e-09 64.7 96 32.3
TPR.G25618 Trifolium pratense HOM05D000003 ORTHO05D000004 7.8e-09 64.7 95 34.7
Cpa.g.sc35.55 Carica papaya HOM05D000003 ORTHO05D000004 1.0e-08 64.3 83 32.5
PSO675G7936 Papaver somniferum HOM05D000003 ORTHO05D000004 1.0e-08 64.3 90 36.7
QL11p036849 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-08 64.3 93 31.2
Rhsim02G0190000 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.0e-08 64.3 40 72.5
PGSC0003DMG400014038 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.0e-08 64.3 91 35.2
Aqoxy2G01919 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-08 63.9 84 35.7
CSS0007419 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-08 63.9 99 32.3
PSO339G3532 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-08 63.9 84 33.3
PSO832G3948 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-08 63.9 98 34.7
Hund14265 Selenicereus undatus HOM05D003118 ORTHO05D003618 1.3e-08 63.9 134 26.9
PSO478G0488 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-08 63.5 84 35.7
GSVIVG01004252001 Vitis vinifera HOM05D000003 ORTHO05D000004 1.7e-08 63.5 92 34.8
MBI13_g34916_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.3e-08 63.2 101 29.7
QL02p084961 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-08 63.2 78 37.2
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 2.3e-08 63.2 135 27.4
PGSC0003DMG400011299 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.0e-08 62.8 91 31.9
Aqoxy1G02855 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.9e-08 62.4 93 34.4
CSS0028483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-08 62.4 96 29.2
QL08p021213 Quercus lobata HOM05D003066 ORTHO05D000004 3.9e-08 62.4 138 27.5
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.9e-08 62.4 95 30.5
PGSC0003DMG403018810 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.9e-08 62.4 91 31.9
CSS0003615 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.1e-08 62.0 109 29.4
PSO210G2794 Papaver somniferum HOM05D000003 ORTHO05D000004 5.1e-08 62.0 108 29.6
PSO782G2371 Papaver somniferum HOM05D000003 ORTHO05D000004 5.1e-08 62.0 101 32.7
GSVIVG01003937001 Vitis vinifera HOM05D000003 ORTHO05D000004 5.1e-08 62.0 97 29.9
Aqoxy3G01395 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.6e-08 61.6 85 35.3
PSO384G1283 Papaver somniferum HOM05D000003 ORTHO05D000004 6.6e-08 61.6 84 38.1
PSO832G2012 Papaver somniferum HOM05D000003 ORTHO05D000004 6.6e-08 61.6 83 34.9
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 6.6e-08 61.6 60 48.3
Aqoxy4G01680 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.6e-08 61.2 110 30.0
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.6e-08 61.2 111 29.7
Cpa.g.sc32.75 Carica papaya HOM05D000003 ORTHO05D000004 8.6e-08 61.2 98 30.6
MBI05_g25766_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D000924 8.6e-08 61.2 142 25.4
MBI07_g02009_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.6e-08 61.2 104 29.8
PSO478G3614 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-08 61.2 89 38.2
PSO724G0020 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-08 61.2 108 29.6
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 8.6e-08 61.2 94 34.0
Hund00002 Selenicereus undatus HOM05D005986 ORTHO05D007467 8.6e-08 61.2 130 27.7
PGSC0003DMG402011647 Solanum tuberosum HOM05D002779 ORTHO05D003074 8.6e-08 61.2 98 33.7
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-07 60.8 90 34.4
Lj2P24T31 Lonicera japonica HOM05D000003 ORTHO05D000004 1.5e-07 60.5 105 30.5
MBI11_g37079_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.5e-07 60.5 97 27.8
Medtr3g104590 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-07 60.5 148 29.1
PSO170G2952 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-07 60.5 80 38.8
PSO675G4334 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-07 60.5 106 29.2
arahy.Tifrunner.gnm1.ann1.8AAX84 Arachis hypogaea HOM05D000003 ORTHO05D000004 1.9e-07 60.1 104 31.7
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-07 60.1 111 28.8
CANSAT01G3175 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-07 60.1 69 40.6
PSO161G0052 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-07 60.1 104 32.7
QL04p049165 Quercus lobata HOM05D003044 ORTHO05D001869 1.9e-07 60.1 67 41.8
QL06p027601 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-07 60.1 78 37.2
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-07 59.7 98 31.6
Sopen11g018640 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-07 59.7 87 32.2
Aqoxy1G03628 Aquilegia oxysepala HOM05D090099 ORTHO05D000004 3.3e-07 59.3 76 40.8
PSO675G3943 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-07 59.3 99 30.3
PSO781G0050 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-07 59.3 93 29.0
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.3e-07 59.3 101 31.7
Aqoxy2G02832 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.3e-07 58.9 97 29.9
Aqoxy6G01346 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.3e-07 58.9 102 30.4
Cpa.g.sc195.3 Carica papaya HOM05D000003 ORTHO05D000004 4.3e-07 58.9 98 31.6
MBI19_g24071_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 4.3e-07 58.9 98 30.6
PSO013G0097 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-07 58.9 109 29.4
PSO017G4508 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-07 58.9 98 32.7
PSO063G1733 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-07 58.9 106 33.0
PSO170G0745 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-07 58.9 94 34.0
PSO210G0734 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-07 58.9 77 31.2
PSO541G6142 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-07 58.9 90 34.4
QL02p067529 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-07 58.9 67 40.3
CSS0030341 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.6e-07 58.5 123 30.1
PSO782G3565 Papaver somniferum HOM05D000003 ORTHO05D000004 5.6e-07 58.5 72 37.5
QL06p031608 Quercus lobata HOM05D000003 ORTHO05D000004 5.6e-07 58.5 100 30.0
Hund12803 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.6e-07 58.5 67 38.8
CSS0006402 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.3e-07 58.2 92 34.8
MBI01_g01229_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D000004 7.3e-07 58.2 130 26.2
MBI02_g21885_MAGBIO Magnolia biondii HOM05D003439 ORTHO05D004062 7.3e-07 58.2 109 28.4
PSO063G2417 Papaver somniferum HOM05D000003 ORTHO05D000004 7.3e-07 58.2 96 32.3
PSO063G5867 Papaver somniferum HOM05D000003 ORTHO05D000004 7.3e-07 58.2 118 31.4
TPR.G40382 Trifolium pratense HOM05D000003 ORTHO05D000004 7.3e-07 58.2 91 33.0
Aqoxy4G01729 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.5e-07 57.8 100 31.0
Aqoxy6G02329 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.5e-07 57.8 120 32.5
ECA247G0123 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.5e-07 57.8 98 35.7
ECA248G1047 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.5e-07 57.8 102 31.4
PSO135G0967 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-07 57.8 94 31.9
PSO339G0951 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-07 57.8 115 33.0
PSO339G3647 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-07 57.8 114 31.6
PSO478G0875 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-07 57.8 112 33.0
QL09p042482 Quercus lobata HOM05D003081 ORTHO05D003627 9.5e-07 57.8 99 32.3
GSVIVG01032339001 Vitis vinifera HOM05D000003 ORTHO05D000004 9.5e-07 57.8 69 39.1
CSS0039671 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-06 57.4 90 34.4
Cpa.g.sc70.66 Carica papaya HOM05D000003 ORTHO05D000004 1.2e-06 57.4 83 31.3
ECA233G2998 Erigeron canadensis HOM05D009093 ORTHO05D010576 1.2e-06 57.4 96 32.3
Medtr1g026690 Medicago truncatula HOM05D000003 ORTHO05D000004 1.2e-06 57.4 91 34.1
Potri.018G042350 Populus trichocarpa HOM05D000003 ORTHO05D000004 1.2e-06 57.4 140 30.7
Sopen08g016730 Solanum pennellii HOM05D000003 ORTHO05D012390 1.2e-06 57.4 98 31.6
Cpa.g.sc173.19 Carica papaya HOM05D000003 ORTHO05D000004 1.6e-06 57.0 97 30.9
PSO063G0767 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-06 57.0 72 34.7
QL07p016023 Quercus lobata HOM05D000976 ORTHO05D000847 1.6e-06 57.0 69 36.2
QL07p023909 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-06 57.0 100 29.0
QL93p0118_0006 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-06 57.0 100 29.0
arahy.Tifrunner.gnm1.ann1.TTJ1ZL Arachis hypogaea HOM05D000003 ORTHO05D000004 2.1e-06 56.6 104 32.7
Cpa.g.sc7.229 Carica papaya HOM05D000003 ORTHO05D000004 2.1e-06 56.6 103 29.1
MBI04_g06213_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.1e-06 56.6 97 26.8
Rhsim10G0054300 Rhododendron simsii HOM05D028943 ORTHO05D000004 2.1e-06 56.6 97 35.1
Hund25051 Selenicereus undatus HOM05D000003 ORTHO05D000004 2.1e-06 56.6 67 37.3
PGSC0003DMG400013620 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.1e-06 56.6 90 32.2
PGSC0003DMG400024990 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.1e-06 56.6 90 32.2
CSS0007080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-06 56.2 90 33.3
ECA236G1740 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.8e-06 56.2 102 30.4
MBI06_g15030_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.8e-06 56.2 96 30.2
MBI06_g35598_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.8e-06 56.2 99 27.3
MBI19_g24051_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.8e-06 56.2 92 29.3
PSO339G3081 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-06 56.2 96 32.3
PSO349G0066 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-06 56.2 108 34.3
PSO478G2515 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-06 56.2 95 33.7
PSO596G0036 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-06 56.2 105 31.4
QL06p003549 Quercus lobata HOM05D004938 ORTHO05D006035 2.8e-06 56.2 94 31.9
Medtr4g046817 Medicago truncatula HOM05D002545 ORTHO05D002335 3.6e-06 55.8 92 30.4
PSO210G4787 Papaver somniferum HOM05D000003 ORTHO05D000004 3.6e-06 55.8 145 25.5
QL08p028067 Quercus lobata HOM05D000003 ORTHO05D000004 3.6e-06 55.8 98 32.7
QL08p034434 Quercus lobata HOM05D003773 ORTHO05D004377 3.6e-06 55.8 84 34.5
QL10p021333 Quercus lobata HOM05D000003 ORTHO05D000004 3.6e-06 55.8 92 30.4
Cpa.g.sc44.94 Carica papaya HOM05D000003 ORTHO05D000004 4.7e-06 55.5 89 28.1
Cpa.g.sc82.67 Carica papaya HOM05D000003 ORTHO05D000004 4.7e-06 55.5 92 30.4
MBI13_g36728_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.7e-06 55.5 97 27.8
Medtr3g031290 Medicago truncatula HOM05D002545 ORTHO05D002335 4.7e-06 55.5 94 34.0
PSO210G6951 Papaver somniferum HOM05D000003 ORTHO05D000004 4.7e-06 55.5 102 33.3
PSO302G0219 Papaver somniferum HOM05D000003 ORTHO05D000004 4.7e-06 55.5 101 28.7
PSO832G2999 Papaver somniferum HOM05D000003 ORTHO05D000004 4.7e-06 55.5 94 34.0
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 4.7e-06 55.5 84 32.1
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.2e-06 55.1 102 27.5
MBI16_g27832_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.2e-06 55.1 99 27.3
PSO063G7457 Papaver somniferum HOM05D000003 ORTHO05D000004 6.2e-06 55.1 156 27.6
PSO339G4346 Papaver somniferum HOM05D000003 ORTHO05D000004 6.2e-06 55.1 62 41.9
PSO349G0279 Papaver somniferum HOM05D000003 ORTHO05D000004 6.2e-06 55.1 80 36.2
PSO407G0214 Papaver somniferum HOM05D000003 ORTHO05D000004 6.2e-06 55.1 96 30.2
PSO532G0003 Papaver somniferum HOM05D000003 ORTHO05D000004 6.2e-06 55.1 77 36.4
PSO541G0105 Papaver somniferum HOM05D000003 ORTHO05D000004 6.2e-06 55.1 53 39.6
Gohir.D11G307103 Gossypium hirsutum HOM05D008457 ORTHO05D011002 8.1e-06 54.7 97 30.9
PSO782G2386 Papaver somniferum HOM05D000003 ORTHO05D000004 8.1e-06 54.7 123 30.1
QL08p057473 Quercus lobata HOM05D000283 ORTHO05D004861 8.1e-06 54.7 94 31.9
QL11p032628 Quercus lobata HOM05D002228 ORTHO05D002347 8.1e-06 54.7 68 35.3


User provided reference genes

Program Settings