Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0162700 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.6e-172 609.4 308 100.0
Rhsim09G0059600 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.1e-113 412.9 449 56.3
Rhsim01G0162800 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.2e-78 296.6 386 49.5
RhsimUnG0114800 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.0e-43 181.4 240 45.4
Rhsim10G0108400 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.4e-40 171.0 268 40.3
Rhsim02G0074000 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.0e-38 164.9 274 37.6
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 7.8e-31 138.7 155 46.5
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.9e-29 134.0 155 45.8
Rhsim07G0149500 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.3e-21 106.7 141 41.1
Rhsim02G0111600 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.1e-19 101.7 197 37.6
Rhsim05G0131400 Rhododendron simsii HOM05D011426 ORTHO05D011041 7.5e-18 95.5 155 36.8
Rhsim06G0095800 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.7e-17 94.4 155 36.8
Rhsim11G0142500 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.7e-17 94.4 155 36.8
Rhsim05G0098200 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-17 93.6 102 45.1
Rhsim01G0005200 Rhododendron simsii HOM05D011426 ORTHO05D011041 4.9e-17 92.8 155 36.1
Rhsim12G0186600 Rhododendron simsii HOM05D011426 ORTHO05D011041 4.9e-17 92.8 153 36.6
RhsimUnG0238600 Rhododendron simsii HOM05D011426 ORTHO05D011041 6.4e-17 92.4 147 40.1
Rhsim08G0133000 Rhododendron simsii HOM05D009719 ORTHO05D011041 7.8e-15 85.5 495 23.6
RhsimUnG0238500 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.1e-13 81.6 127 39.4
Rhsim12G0034100 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.5e-13 81.3 76 47.4
Rhsim12G0073400 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.2e-12 78.2 144 32.6
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 1.6e-12 77.8 155 31.6
vmacro10800 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 1.4e-11 74.7 155 31.6
Rhsim10G0120700 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.8e-11 74.3 135 34.8
Rhsim01G0103900 Rhododendron simsii HOM05D011426 ORTHO05D011041 5.2e-11 72.8 132 33.3
Dinv00626 Davidia involucrata HOM05D007544 ORTHO05D009682 1.2e-10 71.6 168 28.0
CSS0031619 Camellia sinensis var. sinensis HOM05D011426 ORTHO05D011041 9.9e-10 68.6 115 34.8
Dinv33528 Davidia involucrata HOM05D007544 ORTHO05D009682 2.2e-09 67.4 125 29.6
Dinv35899 Davidia involucrata HOM05D007544 ORTHO05D009682 2.2e-09 67.4 96 30.2
Dinv09698 Davidia involucrata HOM05D007544 ORTHO05D009682 3.7e-09 66.6 122 30.3
Dinv28085 Davidia involucrata HOM05D007544 ORTHO05D009682 3.7e-09 66.6 122 30.3
Rhsim12G0083900 Rhododendron simsii HOM05D009719 ORTHO05D011041 6.4e-09 65.9 88 42.0
Rhsim09G0072700 Rhododendron simsii HOM05D009719 ORTHO05D011041 8.3e-09 65.5 86 44.2
Rhsim10G0013200 Rhododendron simsii HOM05D009719 ORTHO05D011041 8.3e-09 65.5 86 44.2
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 1.9e-08 64.3 124 33.1
Dinv02312 Davidia involucrata HOM05D007544 ORTHO05D009682 2.4e-08 63.9 149 28.9
Rhsim05G0080000 Rhododendron simsii HOM05D003762 ORTHO05D004374 4.1e-08 63.2 49 57.1
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 4.6e-07 59.7 133 29.3
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 3.0e-06 57.0 128 28.9
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 3.0e-06 57.0 133 30.8
AUR62039905 Chenopodium quinoa HOM05D008127 ORTHO05D000898 3.9e-06 56.6 123 29.3
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 3.9e-06 56.6 133 29.3
arahy.Tifrunner.gnm1.ann1.MLQS0T Arachis hypogaea HOM05D010233 ORTHO05D010881 5.1e-06 56.2 143 25.2
AUR62011603 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-06 56.2 118 33.1
AUR62014237 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-06 56.2 118 33.1
AUR62028801 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-06 56.2 118 33.1
AUR62030114 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-06 56.2 118 33.1
AUR62030619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-06 56.2 118 33.1
AUR62033389 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-06 56.2 118 33.1
AUR62034832 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-06 56.2 118 33.1
AUR62035391 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-06 56.2 118 33.1
AUR62040042 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-06 56.2 118 33.1
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 5.1e-06 56.2 133 30.1
AUR62005044 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.6e-06 55.8 118 33.1
AUR62006829 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.6e-06 55.8 118 32.2
AUR62034039 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.6e-06 55.8 118 33.1
AUR62043170 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.6e-06 55.8 118 33.1
Ah.04g154800 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.6e-06 55.5 143 27.3
AUR62030064 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.6e-06 55.5 118 33.1
AUR62043619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.6e-06 55.5 117 32.5


User provided reference genes

Program Settings