Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0160600 Rhododendron simsii HOM05D000559 ORTHO05D338566 5.0e-31 137.1 68 100.0
CSS0033776 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 2.0e-08 62.0 37 81.1
CSS0045422 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 2.0e-08 62.0 37 81.1
Hma1.2p1_0283F.1_g113460 Hydrangea macrophylla HOM05D000559 ORTHO05D000596 3.8e-07 57.8 36 75.0
MD02G1197500 Malus domestica HOM05D000559 ORTHO05D000596 8.6e-07 56.6 42 66.7
Nitab4.5_0009638g0010 Nicotiana tabacum HOM05D000559 ORTHO05D000596 1.1e-06 56.2 36 72.2
Peaxi162Scf02113g00016 Petunia axillaris HOM05D000559 ORTHO05D000596 1.1e-06 56.2 36 72.2
GSVIVG01030838001 Vitis vinifera HOM05D000559 ORTHO05D000596 1.1e-06 56.2 36 72.2
Sed0004935 Sechium edule HOM05D000559 ORTHO05D000596 1.5e-06 55.8 36 72.2
TWI74G0742 Tripterygium wilfordii HOM05D000559 ORTHO05D000596 1.5e-06 55.8 36 72.2
TAR374G1348 Trochodendron aralioides HOM05D000559 ORTHO05D000596 1.5e-06 55.8 37 70.3
MSTRG.17221 Avicennia marina HOM05D000559 ORTHO05D000596 2.5e-06 55.1 42 64.3
Cpa.g.sc116.34 Carica papaya HOM05D000559 ORTHO05D000596 2.5e-06 55.1 36 72.2
CsaV3_3G021590 Cucumis sativus L. HOM05D000559 ORTHO05D000596 2.5e-06 55.1 43 58.1
Carub.0002s1247 Capsella rubella HOM05D000559 ORTHO05D000596 3.3e-06 54.7 42 59.5
CiPaw.03G100100 Carya illinoinensis HOM05D000559 ORTHO05D000596 3.3e-06 54.7 36 72.2
Hma1.2p1_0033F.1_g020770 Hydrangea macrophylla HOM05D000559 ORTHO05D000596 3.3e-06 54.7 36 72.2
MD17G1257700 Malus domestica HOM05D000559 ORTHO05D000596 3.3e-06 54.7 42 61.9
RcHm_v2.0_Chr3g0493391 Rosa chinensis HOM05D000559 ORTHO05D000596 3.3e-06 54.7 36 69.4
THA.LOC104805607 Tarenaya hassleriana HOM05D000559 ORTHO05D000596 3.3e-06 54.7 36 69.4
vmacro09871 Vaccinium macrocarpon HOM05D000559 ORTHO05D000596 3.3e-06 54.7 36 72.2
AL2G24240 Arabidopsis lyrata HOM05D000559 ORTHO05D000596 4.2e-06 54.3 42 61.9
AT1G66430 Arabidopsis thaliana HOM05D000559 ORTHO05D000596 4.2e-06 54.3 42 61.9
BcaC08g46054 Brassica carinata HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 69.4
A07p33410 Brassica napus HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 69.4
C06p39810 Brassica napus HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 69.4
BolC6t39068H Brassica oleracea HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 69.4
BraA07t30968Z Brassica rapa HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 69.4
CARHR058420 Cardamine hirsuta HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 69.4
Ciclev10011546m.g Citrus clementina HOM05D000559 ORTHO05D000596 4.2e-06 54.3 44 59.1
Thhalv10018694m.g Eutrema salsugineum HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 69.4
Peaxi162Scf00008g01622 Petunia axillaris HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 69.4
Sp5g21500 Schrenkiella parvula HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 69.4
Solyc02g091490.4 Solanum lycopersicum HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 72.2
Sopen02g036110 Solanum pennellii HOM05D000559 ORTHO05D000596 4.2e-06 54.3 36 72.2
Actinidia31799 Actinidia chinensis HOM05D000559 ORTHO05D000596 5.5e-06 53.9 42 64.3
Ah.16g101230 Amaranthus hybridus HOM05D000559 ORTHO05D000596 5.5e-06 53.9 36 69.4
MSTRG.20779 Avicennia marina HOM05D000559 ORTHO05D000596 5.5e-06 53.9 36 66.7
AUR62023180 Chenopodium quinoa HOM05D000559 ORTHO05D000596 5.5e-06 53.9 36 69.4
AUR62023226 Chenopodium quinoa HOM05D000559 ORTHO05D000596 5.5e-06 53.9 36 69.4
Ciclev10005308m.g Citrus clementina HOM05D000559 ORTHO05D000596 5.5e-06 53.9 43 60.5
Migut.F01161 Erythranthe guttata HOM05D000559 ORTHO05D000596 5.5e-06 53.9 42 59.5
Nn3g18253 Nelumbo nucifera HOM05D000559 ORTHO05D000596 5.5e-06 53.9 36 69.4
Potri.017G126300 Populus trichocarpa HOM05D000559 ORTHO05D000596 5.5e-06 53.9 42 59.5
Actinidia17224 Actinidia chinensis HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
arahy.Tifrunner.gnm1.ann1.P1Z684 Arachis hypogaea HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
BcaB03g15268 Brassica carinata HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
CAN.G1061.43 Capsicum annuum HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
ClCG05G011020 Citrullus lanatus HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
Cc02_g36990 Coffea canephora HOM05D000559 ORTHO05D000596 7.2e-06 53.5 44 61.4
Dinv14887 Davidia involucrata HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 72.2
Eucgr.F02835 Eucalyptus grandis HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
Nitab4.5_0001376g0030 Nicotiana tabacum HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
Nitab4.5_0003356g0010 Nicotiana tabacum HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
Sabra17G0106000 Salix brachista HOM05D000559 ORTHO05D000596 7.2e-06 53.5 45 60.0
SalBow3G4654 Salvia bowleyana HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
PGSC0003DMG400030653 Solanum tuberosum HOM05D000559 ORTHO05D000596 7.2e-06 53.5 36 69.4
ECA232G4154 Erigeron canadensis HOM05D000559 ORTHO05D000596 9.5e-06 53.1 42 57.1
Lsat_1_v5_gn_2_130100 Lactuca sativa HOM05D000559 ORTHO05D000596 9.5e-06 53.1 42 59.5
MBI11_g11984_MAGBIO Magnolia biondii HOM05D000559 ORTHO05D000596 9.5e-06 53.1 36 69.4
Prupe.3G160500 Prunus persica HOM05D000559 ORTHO05D000596 9.5e-06 53.1 36 69.4


User provided reference genes

Program Settings