Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0160300 Rhododendron simsii HOM05D000045 ORTHO05D010036 8.5e-63 243.4 117 100.0
Rhsim02G0178700 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.2e-36 154.5 85 87.1
Rhsim04G0102900 Rhododendron simsii HOM05D000045 ORTHO05D010036 6.8e-36 154.1 85 87.1
Rhsim07G0150300 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.5e-35 150.6 83 85.5
Rhsim05G0122000 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.5e-32 141.7 85 80.0
Rhsim07G0161600 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.5e-32 141.7 85 78.8
Rhsim05G0116800 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.5e-32 141.4 85 78.8
RhsimUnG0089200 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.9e-32 141.0 85 80.0
Rhsim07G0160800 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.0e-31 140.2 85 78.8
Rhsim01G0177800 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.3e-31 139.8 85 78.8
Rhsim12G0090300 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.3e-31 139.8 79 84.8
Rhsim02G0163400 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.7e-31 139.4 85 78.8
Rhsim05G0228500 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.7e-31 139.4 85 78.8
Rhsim13G0135200 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.3e-31 139.0 83 78.3
Rhsim03G0080800 Rhododendron simsii HOM05D000045 ORTHO05D010036 8.6e-31 137.1 85 78.8
Rhsim05G0139200 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.1e-30 136.7 85 76.5
Rhsim02G0137500 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.1e-29 132.5 83 78.3
Rhsim09G0059900 Rhododendron simsii HOM05D000045 ORTHO05D010036 4.0e-28 128.3 81 72.8
Rhsim12G0117700 Rhododendron simsii HOM05D000045 ORTHO05D010036 4.0e-28 128.3 78 75.6
Rhsim09G0033300 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.7e-26 121.7 91 64.8
Rhsim04G0171600 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.0e-24 115.9 83 67.5
Rhsim05G0121500 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.0e-24 115.9 83 67.5
Rhsim06G0086700 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.3e-22 107.5 85 63.5
Rhsim07G0159000 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.3e-22 107.5 90 57.8
RhsimUnG0122000 Rhododendron simsii HOM05D000045 ORTHO05D000009 2.1e-21 105.9 85 60.0
RhsimUnG0116300 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.7e-21 104.8 60 76.7
Rhsim08G0146600 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-20 103.6 90 57.8
Rhsim10G0159200 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.1e-20 102.1 90 55.6
Rhsim08G0163900 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.2e-20 101.3 85 60.0
Rhsim06G0110600 Rhododendron simsii HOM05D000045 ORTHO05D010036 8.9e-20 100.5 85 61.2
Rhsim09G0160500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.2e-19 100.1 83 57.8
Rhsim12G0095300 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.5e-19 99.8 90 54.4
Rhsim08G0163800 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.6e-19 99.0 85 57.6
Rhsim13G0132100 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.2e-18 95.9 90 52.2
Rhsim02G0171700 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.9e-18 95.5 85 55.3
Rhsim02G0163900 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-17 93.6 90 54.4
Rhsim10G0164100 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.1e-17 93.6 85 58.8
Rhsim05G0048700 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.4e-17 92.4 85 56.5
Rhsim11G0003900 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.4e-17 92.4 85 56.5
Rhsim01G0160100 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.0e-17 90.9 74 60.8
Rhsim13G0127000 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.0e-17 90.9 85 54.1
Rhsim05G0179300 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.1e-16 89.4 74 60.8
Rhsim01G0177900 Rhododendron simsii HOM05D000045 ORTHO05D010036 4.6e-16 88.2 64 60.9
Rhsim01G0113700 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.8e-16 87.4 85 55.3
Rhsim08G0120600 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.0e-15 85.5 74 58.1
Rhsim05G0115200 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.9e-15 85.1 83 53.0
Rhsim02G0184800 Rhododendron simsii HOM05D000045 ORTHO05D010036 5.1e-15 84.7 85 54.1
Rhsim10G0098100 Rhododendron simsii HOM05D000006 ORTHO05D010036 2.5e-14 82.4 72 58.3
Rhsim09G0077400 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.3e-14 82.0 68 61.8
FvH4_4g06321 Fragaria vesca HOM05D019783 ORTHO05D022550 3.6e-13 78.6 93 43.0
FvH4_5g31093 Fragaria vesca HOM05D000045 ORTHO05D010036 8.1e-13 77.4 105 41.9
Atru.chr4.2354 Acer truncatum HOM05D000045 ORTHO05D000067 1.4e-12 76.6 78 50.0
Atru.chr4.2343 Acer truncatum HOM05D000045 ORTHO05D000067 2.3e-12 75.9 78 50.0
Ciclev10013881m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.2e-11 73.6 82 47.6
FvH4_2g02512 Fragaria vesca HOM05D000045 ORTHO05D010036 1.5e-11 73.2 77 46.8
FvH4_6g21931 Fragaria vesca HOM05D000045 ORTHO05D000067 2.0e-11 72.8 93 39.8
Ciclev10030397m.g Citrus clementina HOM05D009480 ORTHO05D010036 2.6e-11 72.4 83 47.0
Rhsim02G0156000 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.4e-10 67.8 63 54.0
Ciclev10003378m.g Citrus clementina HOM05D000045 ORTHO05D010036 5.4e-09 64.7 79 44.3
TWI31G1262 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.2e-09 63.9 73 46.6
FvH4_4g18162 Fragaria vesca HOM05D009480 ORTHO05D010036 2.7e-08 62.4 84 40.5
MSTRG.21827 Avicennia marina HOM05D000045 ORTHO05D000067 1.3e-07 60.1 85 42.4
QL02p051760 Quercus lobata HOM05D000045 ORTHO05D000067 1.3e-07 60.1 82 39.0
TWI56G1493 Tripterygium wilfordii HOM05D000045 ORTHO05D010036 1.3e-07 60.1 74 40.5
Hund04370 Selenicereus undatus HOM05D000045 ORTHO05D000695 1.7e-07 59.7 78 39.7
Hma1.2p1_0511F.1_g169165 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 3.9e-07 58.5 85 42.4
Hund15210 Selenicereus undatus HOM05D000045 ORTHO05D000695 3.9e-07 58.5 90 37.8
HanXRQChr03g0079901 Helianthus annuus HOM05D000045 ORTHO05D000067 6.6e-07 57.8 92 38.0
Rhsim02G0017200 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.6e-07 57.8 92 39.1
CSS0008662 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.6e-07 57.4 85 42.4
Migut.N00138 Erythranthe guttata HOM05D000045 ORTHO05D000067 8.6e-07 57.4 85 40.0
CAN.G1778.6 Capsicum annuum HOM05D000045 ORTHO05D000067 1.1e-06 57.0 85 40.0
FvH4_4g29541 Fragaria vesca HOM05D000045 ORTHO05D010036 1.1e-06 57.0 82 37.8
Nitab4.5_0008568g0050 Nicotiana tabacum HOM05D000045 ORTHO05D000067 1.1e-06 57.0 92 40.2
Hund24534 Selenicereus undatus HOM05D000045 ORTHO05D000695 1.1e-06 57.0 71 39.4
Solyc10g084220.3 Solanum lycopersicum HOM05D000045 ORTHO05D000067 1.1e-06 57.0 85 40.0
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.5e-06 56.6 82 40.2
FvH4_4g27332 Fragaria vesca HOM05D017263 ORTHO05D020626 1.9e-06 56.2 80 43.8
ECA240G0528 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.3e-06 55.5 92 38.0
HanXRQChr13g0409861 Helianthus annuus HOM05D000045 ORTHO05D000067 3.3e-06 55.5 92 38.0
Nitab4.5_0001192g0010 Nicotiana tabacum HOM05D000045 ORTHO05D000067 4.3e-06 55.1 92 39.1
TAR629G1531 Trochodendron aralioides HOM05D000045 ORTHO05D000067 4.3e-06 55.1 83 36.1
MSTRG.24763 Avicennia marina HOM05D000045 ORTHO05D000067 5.6e-06 54.7 92 39.1
CSS0049102 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.3e-06 54.3 85 40.0
Aqoxy3G01610 Aquilegia oxysepala HOM05D000045 ORTHO05D010036 9.5e-06 53.9 82 39.0
TAR633G1461 Trochodendron aralioides HOM05D000045 ORTHO05D000067 9.5e-06 53.9 83 36.1


User provided reference genes

Program Settings