Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0158600 Rhododendron simsii HOM05D012502 ORTHO05D000044 0.0e+00 1156.4 613 100.0
Rhsim11G0018000 Rhododendron simsii HOM05D012502 ORTHO05D339070 5.6e-73 279.6 341 50.4
Rhsim01G0063400 Rhododendron simsii HOM05D012502 ORTHO05D339006 1.6e-67 261.5 275 50.5
Rhsim01G0164100 Rhododendron simsii HOM05D012502 ORTHO05D339501 2.3e-50 204.5 315 42.9
Rhsim01G0137600 Rhododendron simsii HOM05D012502 ORTHO05D340378 4.3e-49 200.3 169 62.7
Rhsim01G0085100 Rhododendron simsii HOM05D012502 ORTHO05D340087 7.4e-49 199.5 202 53.5
Rhsim06G0202100 Rhododendron simsii HOM05D012502 ORTHO05D339231 3.7e-48 197.2 440 34.5
Rhsim10G0210200 Rhododendron simsii HOM05D012502 ORTHO05D338414 4.0e-47 193.7 195 55.4
Rhsim11G0028400 Rhododendron simsii HOM05D012502 ORTHO05D340372 2.4e-31 141.4 251 40.2
Rhsim07G0159100 Rhododendron simsii HOM05D000045 ORTHO05D009425 5.5e-20 103.6 55 83.6
vmacro10636 Vaccinium macrocarpon HOM05D003041 ORTHO05D003400 2.4e-15 88.2 220 30.0
Rhsim11G0143600 Rhododendron simsii HOM05D000995 ORTHO05D000044 1.7e-13 82.0 51 74.5
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 5.0e-13 80.5 269 26.0
RcHm_v2.0_Chr7g0239101 Rosa chinensis HOM05D000047 ORTHO05D000044 3.6e-11 74.3 51 58.8
TWI15G0996 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 6.1e-11 73.6 54 51.9
TWI32G0129 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 8.0e-11 73.2 69 49.3
RcHm_v2.0_Chr5g0038141 Rosa chinensis HOM05D000047 ORTHO05D000044 1.0e-10 72.8 51 58.8
TWI60G0526 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.0e-10 72.8 53 50.9
vmacro18677 Vaccinium macrocarpon HOM05D000127 ORTHO05D000243 1.8e-10 72.0 109 40.4
Rhsim01G0085000 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.0e-10 71.2 52 55.8
RcHm_v2.0_Chr2g0102771 Rosa chinensis HOM05D000047 ORTHO05D000044 3.0e-10 71.2 54 57.4
TWI39G0526 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.3e-09 67.8 51 49.0
TWI59G1176 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.4e-09 67.4 52 51.9
FvH4_6g45122 Fragaria vesca HOM05D000047 ORTHO05D000044 7.5e-09 66.6 52 51.9
TWI09G1598 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.2e-08 65.1 52 48.1
TWI39G0933 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.1e-07 62.8 52 48.1
FvH4_4g05272 Fragaria vesca HOM05D000047 ORTHO05D000044 9.1e-07 59.7 54 46.3
TWI75G0659 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.0e-06 58.5 46 50.0
Medtr0002s0960 Medicago truncatula HOM05D005194 ORTHO05D000044 3.5e-06 57.8 107 34.6


User provided reference genes

Program Settings