Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0149000 Rhododendron simsii HOM05D005612 ORTHO05D007014 3.2e-74 281.6 132 100.0
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 2.5e-42 175.6 243 43.6
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 1.3e-38 163.3 243 40.7
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 1.4e-37 159.8 243 40.3
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 1.4e-37 159.8 235 40.0
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 1.8e-37 159.5 243 39.9
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 4.1e-37 158.3 243 40.7
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 5.3e-37 157.9 243 40.7
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 3.4e-36 155.2 235 40.9
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 5.9e-36 154.5 183 45.4
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 7.6e-36 154.1 235 41.3
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 1.3e-35 153.3 243 39.1
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 1.7e-35 152.9 243 39.1
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 1.7e-35 152.9 243 38.7
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 2.2e-35 152.5 243 38.3
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.2e-35 152.5 243 37.9
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.2e-35 152.5 243 37.9
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.2e-35 152.5 243 37.9
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 2.9e-35 152.1 243 38.3
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 3.8e-35 151.8 243 37.9
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 5.0e-35 151.4 232 39.2
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 5.0e-35 151.4 243 37.9
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 5.0e-35 151.4 235 38.7
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 6.5e-35 151.0 243 38.7
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 8.5e-35 150.6 243 37.9
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 1.4e-34 149.8 243 37.9
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 2.5e-34 149.1 240 36.7
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 4.2e-34 148.3 243 38.7
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 5.5e-34 147.9 243 37.0
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 5.5e-34 147.9 243 38.3
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 7.2e-34 147.5 240 37.5
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 9.3e-34 147.1 232 38.4
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 2.1e-33 146.0 235 38.7
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 2.1e-33 146.0 243 38.3
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 2.7e-33 145.6 244 36.9
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 4.6e-33 144.8 243 37.9
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 6.1e-33 144.4 235 37.4
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 6.1e-33 144.4 243 37.4
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 7.9e-33 144.1 235 37.0
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 7.9e-33 144.1 235 37.9
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 1.0e-32 143.7 243 36.2
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 1.0e-32 143.7 243 36.2
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 1.0e-32 143.7 243 36.2
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 1.0e-32 143.7 240 35.8
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 1.0e-32 143.7 240 37.1
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 1.0e-32 143.7 243 36.2
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 1.0e-32 143.7 240 36.2
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.3e-32 143.3 243 37.0
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 1.3e-32 143.3 243 36.2
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 1.8e-32 142.9 243 35.8
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 1.8e-32 142.9 235 37.0
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 2.3e-32 142.5 235 38.3
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 2.3e-32 142.5 241 36.5
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 2.3e-32 142.5 240 36.2
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 2.3e-32 142.5 243 35.8
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 3.0e-32 142.1 243 36.6
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 3.0e-32 142.1 243 36.6
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 3.0e-32 142.1 243 36.6
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 5.1e-32 141.4 235 37.4
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 5.1e-32 141.4 241 36.5
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 5.1e-32 141.4 243 35.8
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 5.1e-32 141.4 241 36.1
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 6.7e-32 141.0 240 35.8
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 8.7e-32 140.6 237 35.4
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 1.1e-31 140.2 237 34.6
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 1.1e-31 140.2 243 36.2
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 1.9e-31 139.4 259 34.0
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 1.9e-31 139.4 235 36.6
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 2.5e-31 139.0 244 34.8
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 4.3e-31 138.3 243 37.0
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 5.7e-31 137.9 243 36.2
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 7.4e-31 137.5 243 37.0
VMungo1127G0102 Vigna mungo HOM05D005612 ORTHO05D007014 9.7e-31 137.1 235 35.7
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 2.2e-30 136.0 229 34.9
AUR62019310 Chenopodium quinoa HOM05D005612 ORTHO05D007014 2.2e-30 136.0 235 34.5
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 3.7e-30 135.2 234 36.3
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 6.3e-30 134.4 223 35.9
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 8.2e-30 134.0 223 35.9
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 8.2e-30 134.0 223 35.9
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 8.2e-30 134.0 239 35.6
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 1.1e-29 133.7 243 35.4
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 1.1e-29 133.7 243 35.4
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 1.1e-29 133.7 223 35.9
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 1.1e-29 133.7 237 34.6
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 1.4e-29 133.3 237 34.6
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 2.4e-29 132.5 243 34.2
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 2.4e-29 132.5 241 34.4
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 3.1e-29 132.1 240 35.0
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 4.1e-29 131.7 229 34.5
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 5.3e-29 131.3 223 34.5
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 5.3e-29 131.3 244 32.8
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 6.9e-29 131.0 259 32.4
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 5.9e-28 127.9 217 38.7
FAN19G0199 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.7e-27 126.3 71 78.9
CARHR140520 Cardamine hirsuta HOM05D005612 ORTHO05D007014 3.8e-27 125.2 62 83.9
MSTRG.28297 Avicennia marina HOM05D005612 ORTHO05D007014 5.0e-27 124.8 71 77.5
Duzib138G0844 Durio zibethinus HOM05D005612 ORTHO05D007014 5.0e-27 124.8 71 78.9
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 6.5e-27 124.4 240 32.9
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 1.4e-26 123.2 226 32.7
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 7.2e-26 120.9 70 72.9
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 7.2e-26 120.9 185 37.3
Aa31LG1G26830 Aethionema arabicum HOM05D005612 ORTHO05D007014 9.4e-26 120.6 68 75.0
TAR626G0370 Trochodendron aralioides HOM05D005612 ORTHO05D007014 3.9e-24 115.2 62 85.5
Medtr8g102040 Medicago truncatula HOM05D005612 ORTHO05D007014 6.7e-24 114.4 64 76.6
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 6.7e-24 114.4 220 34.5
Oeu011925.1 Olea europaea HOM05D005612 ORTHO05D007014 3.7e-22 108.6 124 46.8
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 4.1e-21 105.1 248 30.2
Zm00001eb249030 Zea mays HOM05D005612 ORTHO05D007014 5.3e-21 104.8 63 69.8
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 5.3e-21 104.8 63 69.8
MBI14_g08144_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 1.5e-20 103.2 244 31.1
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 2.0e-20 102.8 210 33.8
SMO119G0175 Selaginella moellendorffii HOM05D005612 ORTHO05D007014 2.2e-19 99.4 59 67.8
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 1.0e-16 90.5 208 30.8
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 1.4e-16 90.1 198 31.8
Pp3c17_6010 Physcomitrium patens HOM05D005612 ORTHO05D007014 5.2e-16 88.2 66 56.1
Dinv32369 Davidia involucrata HOM05D005612 ORTHO05D007014 6.7e-16 87.8 54 79.6
ATR0686G054 Amborella trichopoda HOM05D005612 ORTHO05D007014 1.1e-15 87.0 216 27.8
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 2.6e-15 85.9 44 81.8
Glyma.20G076400 Glycine max HOM05D005612 ORTHO05D007014 3.7e-14 82.0 45 71.1
Zm00001eb012290 Zea mays HOM05D005612 ORTHO05D007014 1.1e-13 80.5 44 70.5
Medtr8g102045 Medicago truncatula HOM05D005612 ORTHO05D007014 3.5e-12 75.5 43 79.1
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis HOM05D005612 ORTHO05D007014 1.0e-11 73.9 48 64.6
SGA_v2.0_scaffold153G37000 Striga asiatica HOM05D005612 ORTHO05D007014 1.3e-11 73.6 54 63.0
CARHR140530 Cardamine hirsuta HOM05D005612 ORTHO05D007014 1.0e-08 63.9 54 55.6
Zm00001eb084960 Zea mays HOM05D005612 ORTHO05D007014 4.4e-07 58.5 54 50.0
Zm00001eb321930 Zea mays HOM05D005612 ORTHO05D007014 4.4e-07 58.5 54 50.0
Zm00001eb385140 Zea mays HOM05D005612 ORTHO05D007014 4.4e-07 58.5 54 50.0


User provided reference genes

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