Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 7.9e-59 230.3 124 100.0
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 1.4e-47 193.0 124 83.9
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 1.1e-44 183.3 124 81.5
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 3.7e-40 168.3 121 72.7
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.2e-38 163.3 121 66.1
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 1.5e-38 162.9 121 67.8
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 1.7e-37 159.5 123 66.7
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 2.2e-37 159.1 121 66.9
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 2.9e-37 158.7 123 66.7
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 1.4e-36 156.4 121 66.1
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 1.4e-36 156.4 121 64.5
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 2.5e-36 155.6 121 62.8
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 4.2e-36 154.8 122 65.6
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 1.2e-35 153.3 121 63.6
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 1.6e-35 152.9 121 65.3
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 4.7e-35 151.4 122 64.8
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 6.1e-35 151.0 124 62.9
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 2.3e-34 149.1 121 64.5
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 3.0e-34 148.7 121 62.0
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 3.0e-34 148.7 123 61.0
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 8.8e-34 147.1 121 61.2
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 1.5e-33 146.4 123 59.3
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 3.3e-33 145.2 129 61.2
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 7.4e-33 144.1 117 63.2
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 7.4e-33 144.1 117 63.2
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 1.7e-32 142.9 117 65.8
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.7e-32 142.9 120 61.7
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 2.2e-32 142.5 117 65.0
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 2.2e-32 142.5 117 65.0
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 2.8e-32 142.1 117 65.0
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 4.8e-32 141.4 117 63.2
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 6.3e-32 141.0 114 59.6
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 6.3e-32 141.0 117 62.4
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 8.2e-32 140.6 114 63.2
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 1.8e-31 139.4 121 57.9
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 5.3e-31 137.9 122 63.1
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 7.0e-31 137.5 115 61.7
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 7.0e-31 137.5 112 63.4
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 9.1e-31 137.1 115 60.9
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 1.6e-30 136.3 115 64.3
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.6e-30 136.3 121 55.4
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 2.0e-30 136.0 117 61.5
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 3.5e-30 135.2 123 56.1
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 3.5e-30 135.2 121 57.0
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 3.5e-30 135.2 115 60.9
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 4.5e-30 134.8 121 55.4
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 5.9e-30 134.4 110 62.7
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 1.3e-29 133.3 121 54.5
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.3e-29 133.3 121 54.5
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 1.7e-29 132.9 129 58.9
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 1.7e-29 132.9 129 58.9
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.7e-29 132.9 111 58.6
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 1.7e-29 132.9 116 55.2
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 2.2e-29 132.5 115 56.5
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 5.0e-29 131.3 117 56.4
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 6.5e-29 131.0 114 57.9
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 8.5e-29 130.6 121 54.5
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 1.1e-28 130.2 137 54.0
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 1.1e-28 130.2 127 58.3
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 1.1e-28 130.2 108 58.3
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 1.1e-28 130.2 125 53.6
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 1.5e-28 129.8 122 52.5
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 1.5e-28 129.8 114 55.3
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 1.9e-28 129.4 127 58.3
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 7.2e-28 127.5 93 68.8
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 9.4e-28 127.1 124 56.5
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 2.1e-27 125.9 109 57.8
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 2.7e-27 125.6 119 58.8
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 4.7e-27 124.8 121 57.0
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 8.0e-27 124.0 123 51.2
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.0e-26 123.6 121 50.4
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 1.0e-26 123.6 116 53.4
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 1.8e-26 122.9 113 54.9
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 5.2e-26 121.3 122 54.9
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 2.6e-25 119.0 89 75.3
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 5.7e-25 117.9 112 52.7
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 5.7e-25 117.9 115 48.7
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 1.3e-24 116.7 114 53.5
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 1.7e-24 116.3 117 49.6
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 2.2e-24 115.9 117 49.6
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 2.2e-24 115.9 111 51.4
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 3.7e-24 115.2 129 53.5
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 3.7e-24 115.2 129 53.5
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 4.8e-24 114.8 122 47.5
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 4.8e-24 114.8 119 47.9
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 8.2e-24 114.0 122 47.5
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 8.2e-24 114.0 114 56.1
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 3.1e-23 112.1 122 52.5
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 5.3e-23 111.3 119 47.1
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 5.3e-23 111.3 107 46.7
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 5.3e-23 111.3 112 44.6
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 7.0e-23 110.9 117 45.3
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 1.2e-22 110.2 97 62.9
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.2e-22 110.2 123 48.0
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 3.5e-22 108.6 100 53.0
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 1.0e-21 107.1 123 44.7
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 1.3e-21 106.7 110 49.1
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 2.2e-21 105.9 89 65.2
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 2.9e-21 105.5 95 61.1
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 1.5e-20 103.2 118 47.5
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 3.2e-20 102.1 98 51.0
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 9.4e-20 100.5 141 43.3
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 1.6e-19 99.8 74 70.3
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 1.8e-18 96.3 116 49.1
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 3.0e-18 95.5 116 46.6
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 4.0e-18 95.1 78 57.7
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 6.8e-18 94.4 95 50.5
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.5e-17 93.2 120 44.2
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 9.8e-17 90.5 65 70.8
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 6.3e-16 87.8 63 65.1
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 1.1e-15 87.0 80 60.0
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 4.5e-14 81.6 79 50.6
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 1.6e-11 73.2 53 75.5
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 8.0e-11 70.9 117 38.5
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 6.8e-10 67.8 111 36.0
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 2.0e-09 66.2 104 41.3
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 4.4e-09 65.1 108 34.3
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 2.8e-08 62.4 102 36.3
A03p65120 Brassica napus HOM05D002637 ORTHO05D009046 3.7e-08 62.0 47 72.3
BraA03t15571Z Brassica rapa HOM05D002637 ORTHO05D009046 3.7e-08 62.0 47 72.3


User provided reference genes

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