Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 3.4e-60 235.0 131 100.0
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 4.3e-23 111.7 131 60.3
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 5.3e-21 104.8 127 55.9
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 7.6e-20 100.9 124 54.8
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 1.7e-19 99.8 127 54.3
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 5.5e-18 94.7 122 55.7
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 1.2e-17 93.6 133 47.4
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 5.1e-16 88.2 106 56.6
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 6.7e-16 87.8 128 46.9
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 3.3e-15 85.5 130 50.8
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 3.3e-15 85.5 118 50.0
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 5.7e-15 84.7 124 48.4
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 5.7e-15 84.7 125 49.6
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 7.4e-15 84.3 133 46.6
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.3e-14 83.6 125 51.2
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 1.6e-14 83.2 123 46.3
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.6e-14 83.2 119 48.7
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 2.1e-14 82.8 126 48.4
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 2.1e-14 82.8 124 50.0
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 2.1e-14 82.8 127 45.7
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 4.8e-14 81.6 118 49.2
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 6.3e-14 81.3 94 58.5
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 6.3e-14 81.3 133 44.4
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 8.2e-14 80.9 118 50.8
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 1.1e-13 80.5 112 52.7
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.1e-13 80.5 121 54.5
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.1e-13 80.5 126 48.4
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 1.4e-13 80.1 127 47.2
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 1.4e-13 80.1 95 55.8
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.8e-13 79.7 118 47.5
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 3.1e-13 79.0 148 42.6
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 9.0e-13 77.4 118 46.6
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 9.0e-13 77.4 121 48.8
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 9.0e-13 77.4 125 46.4
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 1.2e-12 77.0 120 50.8
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 1.5e-12 76.6 124 47.6
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.5e-12 76.6 135 45.2
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 2.0e-12 76.3 121 48.8
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 2.6e-12 75.9 132 47.7
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 3.4e-12 75.5 96 56.2
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 4.5e-12 75.1 122 45.1
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 7.6e-12 74.3 126 45.2
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.0e-11 73.9 121 46.3
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.7e-11 73.2 118 48.3
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 3.8e-11 72.0 83 57.8
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 3.8e-11 72.0 88 54.5
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 6.5e-11 71.2 144 40.3
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 6.5e-11 71.2 96 45.8
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 8.4e-11 70.9 165 38.8
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.1e-10 70.5 121 47.9
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.4e-10 70.1 144 40.3
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.4e-10 70.1 144 43.1
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 1.4e-10 70.1 129 45.7
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 2.5e-10 69.3 126 47.6
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 7.2e-10 67.8 87 50.6
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 1.2e-09 67.0 145 40.7
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.2e-09 67.0 82 52.4
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 1.6e-09 66.6 76 51.3
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 2.1e-09 66.2 89 52.8
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 2.7e-09 65.9 142 41.5
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 2.7e-09 65.9 123 46.3
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 2.7e-09 65.9 91 53.8
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 3.5e-09 65.5 125 42.4
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 3.5e-09 65.5 98 45.9
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 3.5e-09 65.5 97 50.5
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 3.5e-09 65.5 97 50.5
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 4.6e-09 65.1 145 40.0
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 4.6e-09 65.1 127 42.5
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 4.6e-09 65.1 149 41.6
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 6.1e-09 64.7 172 34.3
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 6.1e-09 64.7 172 34.3
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.0e-08 63.9 98 49.0
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 3.9e-08 62.0 134 45.5
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 1.1e-07 60.5 84 50.0
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 1.1e-07 60.5 82 51.2
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 2.5e-07 59.3 93 44.1
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.6e-06 56.6 123 40.7
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.6e-06 56.6 93 48.4
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 2.2e-06 56.2 93 48.4
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 6.3e-06 54.7 44 61.4


User provided reference genes

Program Settings