Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 1.7e-277 958.7 491 100.0
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 7.7e-182 641.0 504 71.4
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 2.8e-160 569.3 491 64.4
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 2.8e-160 569.3 491 64.4
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 4.1e-159 565.5 494 63.4
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 2.7e-150 536.2 491 60.7
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 7.7e-150 534.6 490 61.6
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 1.0e-149 534.3 491 59.9
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 1.5e-148 530.4 496 58.9
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 9.5e-148 527.7 491 59.9
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 2.8e-147 526.2 492 59.8
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 3.6e-147 525.8 491 59.1
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 2.3e-146 523.1 493 58.0
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 2.3e-146 523.1 491 59.3
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 6.8e-146 521.5 491 59.7
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 6.8e-146 521.5 491 59.7
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 8.9e-146 521.2 491 58.2
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 2.0e-145 520.0 491 58.5
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 4.4e-145 518.8 495 58.6
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 4.4e-145 518.8 492 58.3
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 5.7e-145 518.5 494 59.3
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 7.5e-145 518.1 491 58.0
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 9.8e-145 517.7 493 58.2
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 9.8e-145 517.7 491 58.0
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.7e-144 516.9 497 58.1
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.2e-144 516.5 492 59.3
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 2.8e-144 516.2 491 57.4
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.7e-144 515.8 492 59.3
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 4.9e-144 515.4 495 57.4
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 4.9e-144 515.4 497 57.9
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 6.3e-144 515.0 491 58.5
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 6.3e-144 515.0 501 57.7
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.1e-143 514.2 492 59.1
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 3.2e-143 512.7 492 58.7
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 3.2e-143 512.7 491 58.0
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 4.1e-143 512.3 491 58.2
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 5.4e-143 511.9 493 58.0
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 1.2e-142 510.8 499 59.3
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 1.6e-142 510.4 503 56.7
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 2.7e-142 509.6 493 56.4
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 4.5e-142 508.8 492 60.6
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 4.5e-142 508.8 492 60.6
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 4.5e-142 508.8 491 57.8
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.0e-141 507.7 491 57.8
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 1.0e-141 507.7 493 57.6
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 1.3e-141 507.3 491 57.2
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 2.3e-141 506.5 493 57.4
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 2.3e-141 506.5 497 56.5
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 2.9e-141 506.1 491 59.7
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 1.1e-140 504.2 495 57.0
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 5.6e-140 501.9 493 57.0
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 7.3e-140 501.5 482 58.7
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 4.7e-139 498.8 491 56.8
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 4.7e-139 498.8 492 57.3
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 8.0e-139 498.0 489 57.7
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 8.0e-139 498.0 491 58.5
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.0e-138 497.7 491 56.6
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 1.0e-138 497.7 391 65.5
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 3.1e-138 496.1 443 60.0
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 8.9e-138 494.6 494 56.7
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 1.5e-137 493.8 491 56.6
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 3.4e-137 492.7 479 57.4
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 5.8e-137 491.9 494 58.3
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 7.5e-137 491.5 494 56.5
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 1.3e-136 490.7 477 58.3
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.7e-136 490.3 477 56.6
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 2.2e-136 490.0 492 56.9
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.2e-134 484.2 492 55.5
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 1.6e-134 483.8 491 55.4
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 1.6e-134 483.8 495 57.2
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 4.6e-134 482.3 491 55.4
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 1.0e-133 481.1 493 57.0
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 3.0e-133 479.6 491 56.4
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 3.9e-133 479.2 491 54.8
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 8.6e-133 478.0 540 51.7
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.8e-130 470.3 489 53.2
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.8e-130 470.3 491 53.6
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.7e-128 463.8 491 55.6
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 2.9e-128 463.0 491 54.8
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 8.3e-128 461.5 398 58.8
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 4.6e-126 455.7 377 62.3
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.9e-124 450.3 494 53.2
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 1.9e-124 450.3 432 54.2
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.6e-123 447.2 498 52.8
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 3.1e-122 443.0 495 52.1
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 4.0e-122 442.6 491 53.2
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 8.9e-122 441.4 491 51.7
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 1.5e-121 440.7 502 53.4
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 2.6e-121 439.9 491 53.2
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 4.1e-119 432.6 495 51.1
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 1.6e-118 430.6 398 55.3
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.5e-118 429.5 498 51.0
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.5e-118 429.5 370 61.6
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 1.0e-117 427.9 390 57.2
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.5e-116 424.1 498 50.6
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 3.2e-111 406.4 491 52.1
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 1.2e-102 377.9 461 49.2
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 1.5e-97 360.9 431 51.0
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.5e-92 343.6 390 46.2
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 1.3e-91 341.3 276 62.3
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 3.7e-91 339.7 387 46.0
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 6.9e-90 335.5 271 62.0
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 6.9e-90 335.5 271 62.0
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 6.9e-90 335.5 271 62.0
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 5.8e-89 332.4 387 45.0
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 1.9e-84 317.4 271 60.5
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 1.3e-83 314.7 311 50.8
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 2.1e-83 313.9 387 42.9
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.0e-77 295.0 208 72.6
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.3e-77 293.9 356 49.2
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.5e-73 281.2 177 75.7
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 2.3e-69 267.3 385 37.4
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 2.7e-62 243.8 398 34.9
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 6.7e-61 239.2 379 35.4
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 6.7e-61 239.2 276 48.2
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 7.7e-57 225.7 213 58.7
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 7.7e-57 225.7 135 80.0
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.6e-54 218.0 372 34.1
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 3.8e-40 170.2 161 50.9
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 1.2e-38 165.2 184 56.0
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 8.3e-35 152.5 109 67.0
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.4e-34 151.0 144 53.5
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.0e-29 135.6 188 47.3
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 2.4e-26 124.4 133 48.1
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 1.3e-24 118.6 84 65.5
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 9.5e-23 112.5 85 64.7
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 8.6e-16 89.4 48 83.3
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 8.6e-16 89.4 48 83.3
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 8.3e-11 72.8 122 42.6
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 3.9e-08 63.9 41 75.6


User provided reference genes

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