Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.1e-73 278.9 135 100.0
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 2.1e-17 92.8 63 57.1
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-16 90.5 63 60.3
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.6e-15 85.9 63 57.1
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.8e-15 84.7 63 55.6
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-14 83.6 63 60.3
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.7e-14 83.2 63 57.1
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 1.7e-14 83.2 63 60.3
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 6.4e-14 81.3 63 54.0
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-13 80.5 62 58.1
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.5e-13 78.2 62 56.5
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.5e-13 78.2 62 56.5
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 9.3e-13 77.4 63 52.4
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.1e-12 76.3 62 54.8
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 5.1e-11 71.6 66 45.5
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 4.3e-10 68.6 66 50.0
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 2.8e-09 65.9 63 49.2
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 3.7e-09 65.5 73 43.8
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 8.2e-09 64.3 75 41.3
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 8.2e-09 64.3 69 39.1
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 8.2e-09 64.3 68 41.2
Rhsim10G0189500 Rhododendron simsii HOM05D019536 ORTHO05D011057 1.4e-08 63.5 71 39.4
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.8e-08 63.2 72 36.1
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 5.3e-08 61.6 66 39.4
vmacro17834 Vaccinium macrocarpon HOM05D000412 ORTHO05D002774 5.3e-08 61.6 53 45.3
Sc17g0002240 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.9e-08 61.2 65 40.0
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 6.9e-08 61.2 63 44.4
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 6.9e-08 61.2 66 43.9
Sc10g0004010 Simmondsia chinensis HOM05D031748 ORTHO05D011057 9.0e-08 60.8 63 39.7
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.2e-07 60.5 69 39.1
Hund01473 Selenicereus undatus HOM05D004760 ORTHO05D006114 1.2e-07 60.5 66 39.4
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.0e-07 59.7 54 42.6
MBI18_g06639_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000004 2.0e-07 59.7 64 42.2
Ah.11g045590 Amaranthus hybridus HOM05D000851 ORTHO05D003960 4.5e-07 58.5 69 40.6
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.5e-07 58.5 63 42.9
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 7.6e-07 57.8 69 36.2
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 7.6e-07 57.8 64 39.1
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 7.6e-07 57.8 78 37.2
Ah.15g100500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.7e-06 56.6 63 42.9
MBI04_g06618_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 1.7e-06 56.6 72 41.7
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-06 56.6 63 39.7
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.2e-06 56.2 51 43.1
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.2e-06 56.2 51 43.1
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.9e-06 55.8 68 36.8
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.9e-06 55.8 63 38.1
MBI04_g05748_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 2.9e-06 55.8 64 40.6
MBI19_g40868_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 2.9e-06 55.8 64 35.9
Ah.02g117550 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.8e-06 55.5 63 39.7
Ah.05g171570 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.8e-06 55.5 63 33.3
MBI14_g46211_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 3.8e-06 55.5 68 33.8
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.8e-06 55.5 42 59.5
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 3.8e-06 55.5 51 47.1
MBI14_g21901_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 4.9e-06 55.1 64 37.5
MBI18_g24125_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D003276 4.9e-06 55.1 63 36.5
MBI19_g02313_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 4.9e-06 55.1 64 43.8
Ah.14g081710 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.5e-06 54.7 63 38.1
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.5e-06 54.7 64 42.2
Gorai.009G210200 Gossypium raimondii HOM05D038512 ORTHO05D015081 6.5e-06 54.7 73 37.0
MBI01_g21244_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 6.5e-06 54.7 64 37.5
MBI14_g14766_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 6.5e-06 54.7 64 40.6
Ah.05g173090 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.4e-06 54.3 63 34.9
Ah.06g183510 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.4e-06 54.3 66 37.9
Ah.11g040120 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.4e-06 54.3 63 41.3
MBI16_g41831_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 8.4e-06 54.3 121 32.2
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 8.4e-06 54.3 73 34.2
Sc16g0006020 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.4e-06 54.3 66 37.9
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 8.4e-06 54.3 67 40.3
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 8.4e-06 54.3 76 39.5
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 8.4e-06 54.3 51 45.1


User provided reference genes

Program Settings