Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0125100 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.4e-130 468.8 226 100.0
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.6e-68 262.7 141 88.7
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.9e-67 259.2 141 88.7
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.9e-67 259.2 141 88.7
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-66 256.5 141 87.9
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.4e-51 204.5 148 66.9
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.0e-43 178.7 148 58.1
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.5e-39 166.4 147 53.7
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.4e-37 159.8 139 53.2
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.9e-36 155.2 135 56.3
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.0e-35 152.1 149 53.7
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.5e-35 151.4 148 48.6
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.1e-34 151.0 148 47.3
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.1e-33 145.2 150 52.0
Rhsim11G0020100 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.9e-33 144.8 117 60.7
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 3.0e-32 142.9 148 50.0
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 3.9e-32 142.5 147 51.0
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.9e-32 142.5 124 59.7
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.9e-32 142.5 131 58.0
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-31 141.0 148 45.9
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-31 141.0 131 57.3
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.5e-31 140.6 147 49.7
PSO832G4354 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-31 139.8 142 49.3
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.7e-31 137.9 131 56.5
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 1.3e-30 137.5 148 48.6
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.7e-30 136.0 146 44.5
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 8.2e-30 134.8 148 43.2
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-29 134.0 142 46.5
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-29 133.7 165 39.4
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-29 133.3 142 47.2
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.1e-29 132.9 150 48.7
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 3.1e-29 132.9 165 39.4
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.3e-29 132.1 146 44.5
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 9.1e-29 131.3 138 43.5
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-28 131.0 138 43.5
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-28 130.6 142 46.5
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-28 130.6 142 46.5
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-27 127.9 138 42.0
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-27 127.9 142 45.1
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-27 127.9 142 45.1
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-27 127.9 142 45.1
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-27 127.5 142 45.1
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-27 127.1 140 43.6
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-27 126.7 125 52.0
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 2.2e-27 126.7 140 45.0
PSO210G4431 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-26 124.4 142 44.4
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 1.5e-26 124.0 125 51.2
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.5e-26 123.2 147 45.6
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.2e-26 122.9 140 45.7
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.2e-26 122.9 147 45.6
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 5.5e-26 122.1 146 41.8
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 5.5e-26 122.1 142 44.4
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 5.5e-26 122.1 146 42.5
Rhsim08G0101000 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.2e-26 121.7 94 59.6
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 1.2e-25 120.9 116 50.0
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 2.7e-25 119.8 160 36.9
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.6e-25 119.4 122 46.7
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 6.1e-25 118.6 146 41.1
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 6.1e-25 118.6 140 40.0
PSO384G2001 Papaver somniferum HOM05D003057 ORTHO05D003904 6.1e-25 118.6 140 39.3
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.0e-25 118.2 139 40.3
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-24 117.5 140 40.0
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-24 117.5 140 40.0
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-24 117.1 140 40.0
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-24 116.3 139 39.6
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-24 116.3 139 39.6
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-24 116.3 139 39.6
PSO357G0194 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-24 115.9 132 45.5
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.7e-24 115.2 139 39.6
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.8e-24 114.8 145 37.9
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 8.8e-24 114.8 55 94.5
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-23 114.4 141 43.3
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.5e-23 114.0 139 38.8
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-23 113.2 139 38.8
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.3e-23 112.8 139 38.8
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.3e-23 112.8 139 38.8
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.4e-23 112.5 139 39.6
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 1.3e-22 110.9 159 40.3
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-22 110.5 139 38.1
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.2e-22 110.2 138 42.0
PSO017G5295 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-22 110.2 140 37.1
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.8e-22 109.8 141 39.0
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.7e-22 109.4 139 37.4
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 8.2e-22 108.2 155 37.4
PSO832G3916 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-21 107.5 155 36.8
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.1e-21 106.3 139 37.4
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.1e-21 106.3 75 65.3
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.3e-21 105.5 139 37.4
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 5.3e-21 105.5 136 39.7
COL.COLO4_37623 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.0e-21 105.1 148 40.5
Os06g0523701 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 2.0e-20 103.6 147 35.4
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.7e-20 103.2 138 39.9
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.9e-20 102.1 139 37.4
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 2.2e-19 100.1 144 41.0
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.8e-19 99.4 138 39.1
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 6.5e-19 98.6 108 40.7
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 2.5e-18 96.7 139 39.6
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-18 96.7 109 40.4
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-18 96.7 110 42.7
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.1e-17 93.6 114 38.6
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 2.1e-17 93.6 133 37.6
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 3.6e-17 92.8 101 41.6
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 4.7e-17 92.4 111 40.5
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 8.0e-17 91.7 128 37.5
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 2.3e-16 90.1 138 34.8
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.8e-16 88.6 143 36.4
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 8.8e-16 88.2 121 38.8
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-15 87.8 138 35.5
Psat7g220920 Pisum sativum HOM05D003057 ORTHO05D003904 1.2e-15 87.8 111 43.2
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-15 87.0 138 34.1
PSO675G7907 Papaver somniferum HOM05D000294 ORTHO05D000177 2.6e-15 86.7 140 31.4
Psat6g164240 Pisum sativum HOM05D003057 ORTHO05D003904 3.4e-15 86.3 108 43.5
Psat7g039600 Pisum sativum HOM05D003057 ORTHO05D003904 3.4e-15 86.3 108 43.5
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.4e-15 85.9 138 34.1
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.7e-15 85.5 138 33.3
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.5e-15 85.1 165 32.1
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 9.8e-15 84.7 111 40.5
TPR.G33575 Trifolium pratense HOM05D003057 ORTHO05D003904 9.8e-15 84.7 84 46.4
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-14 84.0 165 32.1
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-14 84.0 142 33.1
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-14 83.6 139 31.7
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.3e-14 82.0 143 32.9
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.3e-14 82.0 165 32.1
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.3e-14 82.0 159 30.2
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.3e-14 81.6 138 31.9
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.3e-14 81.6 138 32.6
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-13 80.1 75 48.0
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 5.4e-13 79.0 114 39.5
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 5.4e-13 79.0 104 38.5
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 5.4e-13 79.0 138 34.1
TPR.G9017 Trifolium pratense HOM05D003057 ORTHO05D003904 5.4e-13 79.0 75 50.7
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-12 77.8 138 31.2
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-12 77.0 130 33.8
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.5e-12 76.3 114 35.1
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 4.5e-12 75.9 69 50.7
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.7e-12 75.1 138 31.2
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 7.7e-12 75.1 138 32.6
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-11 74.3 114 34.2
Rhsim08G0082500 Rhododendron simsii HOM05D001374 ORTHO05D003576 2.2e-11 73.6 84 52.4
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.5e-11 71.6 114 32.5
Os10g0117400 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 1.9e-10 70.5 123 29.3
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.4e-10 68.2 86 39.5
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 9.4e-10 68.2 146 31.5
PSO675G6041 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-08 63.9 78 42.3
vmacro18074 Vaccinium macrocarpon HOM05D001374 ORTHO05D003576 1.8e-08 63.9 86 45.3
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-08 63.5 77 40.3
Hma1.2p1_2610F.1_g325360 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 2.0e-07 60.5 80 41.2
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.5e-07 58.5 62 41.9
Actinidia26306 Actinidia chinensis HOM05D001374 ORTHO05D003576 1.3e-06 57.8 75 45.3
COL.COLO4_33793 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-06 57.8 94 30.9
COL.COLO4_04362 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.8e-06 56.6 65 38.5
Dinv34820 Davidia involucrata HOM05D001374 ORTHO05D003576 4.9e-06 55.8 74 43.2
Hma1.2p1_1109F.1_g258040 Hydrangea macrophylla HOM05D001374 ORTHO05D003576 8.3e-06 55.1 71 45.1
Lj4A191T47 Lonicera japonica HOM05D001374 ORTHO05D003576 8.3e-06 55.1 68 44.1
TAR371G0613 Trochodendron aralioides HOM05D001374 ORTHO05D003576 8.3e-06 55.1 69 39.1


User provided reference genes

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