Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.4e-105 386.3 200 100.0
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 1.3e-63 246.9 181 76.8
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 4.7e-61 238.4 147 83.0
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 1.7e-58 229.9 150 78.0
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.0e-55 220.7 149 74.5
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 1.9e-54 216.5 160 67.5
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 5.5e-54 214.9 149 73.2
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 8.0e-53 211.1 150 74.0
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 1.4e-52 210.3 148 71.6
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 2.3e-52 209.5 149 70.5
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 2.3e-52 209.5 149 71.8
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 4.0e-52 208.8 157 70.1
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 5.2e-52 208.4 149 70.5
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 5.2e-52 208.4 147 72.8
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 6.8e-52 208.0 147 72.8
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 4.4e-51 205.3 147 72.1
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 4.4e-51 205.3 145 72.4
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 5.7e-51 204.9 150 68.7
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 7.5e-51 204.5 151 71.5
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 9.8e-51 204.1 149 68.5
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 1.7e-50 203.4 151 70.9
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 2.2e-50 203.0 149 71.8
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 3.7e-50 202.2 151 66.9
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 3.7e-50 202.2 147 71.4
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 3.7e-50 202.2 146 72.6
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 6.3e-50 201.4 150 69.3
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 6.3e-50 201.4 160 64.4
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 6.3e-50 201.4 151 70.2
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 8.3e-50 201.1 150 69.3
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 8.3e-50 201.1 159 66.0
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 3.1e-49 199.1 152 68.4
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 4.1e-49 198.7 151 68.9
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 9.1e-49 197.6 148 70.3
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 2.0e-48 196.4 147 68.0
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 2.7e-48 196.1 149 66.4
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 3.5e-48 195.7 147 68.0
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 3.5e-48 195.7 147 68.0
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 5.9e-48 194.9 146 69.2
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 7.7e-48 194.5 147 70.1
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 2.3e-47 193.0 143 69.9
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 2.9e-47 192.6 143 69.2
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 5.0e-47 191.8 147 66.7
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 8.6e-47 191.0 156 64.7
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 1.1e-46 190.7 146 68.5
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 1.1e-46 190.7 147 66.0
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 1.5e-46 190.3 147 68.0
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 1.9e-46 189.9 152 65.8
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.9e-46 189.9 149 66.4
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 2.5e-46 189.5 149 65.8
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 3.3e-46 189.1 162 64.2
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.6e-45 186.8 149 63.8
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.6e-45 186.8 149 65.8
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 2.1e-45 186.4 147 64.6
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 8.0e-45 184.5 141 67.4
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 1.0e-44 184.1 147 65.3
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 6.8e-44 181.4 149 65.8
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 1.2e-43 180.6 146 62.3
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 4.4e-43 178.7 147 62.6
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 9.8e-43 177.6 148 63.5
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 2.8e-42 176.0 148 64.2
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 3.7e-42 175.6 148 59.5
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 9.2e-41 171.0 191 53.4
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.6e-40 170.2 178 56.2
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 1.5e-38 163.7 129 63.6
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 4.3e-38 162.2 148 58.1
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 5.6e-38 161.8 142 59.9
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 5.2e-36 155.2 111 70.3
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 9.8e-35 151.0 101 76.2
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 2.7e-32 142.9 168 51.8
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 5.0e-31 138.7 104 70.2
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 4.7e-29 132.1 142 46.5
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.2e-27 127.5 96 63.5
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 1.2e-27 127.5 98 65.3
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 4.9e-26 122.1 136 43.4
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 1.1e-25 120.9 126 46.8
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 7.0e-25 118.2 88 65.9
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 1.2e-24 117.5 145 40.0
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 3.6e-21 105.9 60 85.0
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 1.5e-19 100.5 64 78.1
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 2.6e-19 99.8 116 49.1
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 2.1e-16 90.1 67 68.7
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.0e-15 86.3 63 68.3
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 1.9e-14 83.6 66 66.7
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 4.7e-13 79.0 51 72.5
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 1.8e-12 77.0 134 28.4
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 8.9e-12 74.7 127 29.9
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 8.4e-10 68.2 53 64.2
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 1.1e-09 67.8 59 59.3
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 8.7e-07 58.2 53 60.4
HanXRQChr11g0352371 Helianthus annuus HOM05D007678 ORTHO05D009658 4.3e-06 55.8 53 50.9


User provided reference genes

Program Settings