Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0119600 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.7e-96 355.9 171 100.0
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 6.6e-72 274.2 152 84.9
Rhsim06G0111000 Rhododendron simsii HOM05D000107 ORTHO05D011435 1.2e-60 236.9 132 83.3
Rhsim03G0082400 Rhododendron simsii HOM05D000874 ORTHO05D001049 7.6e-44 181.0 98 86.7
Rhsim10G0076500 Rhododendron simsii HOM05D003738 ORTHO05D011435 9.9e-44 180.6 95 86.3
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.9e-43 178.3 169 52.1
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 6.4e-43 177.9 169 51.5
Rhsim08G0127400 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.9e-39 166.4 169 49.1
Rhsim02G0150600 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.3e-39 165.2 132 64.4
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 4.8e-38 161.8 141 54.6
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.3e-32 142.9 165 46.1
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.3e-30 137.1 93 63.4
Rhsim01G0135900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.4e-29 132.9 149 43.6
Rhsim09G0078700 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.8e-27 125.6 151 43.7
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 4.3e-23 112.1 143 40.6
Rhsim01G0121300 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.8e-22 108.6 165 36.4
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 6.2e-22 108.2 138 41.3
Rhsim09G0063300 Rhododendron simsii HOM05D000030 ORTHO05D000031 1.1e-21 107.5 122 42.6
Rhsim10G0126300 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.8e-21 106.7 142 38.7
Rhsim07G0148300 Rhododendron simsii HOM05D011579 ORTHO05D011435 6.9e-21 104.8 117 43.6
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.8e-19 99.0 92 46.7
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 6.5e-19 98.2 92 46.7
Rhsim09G0063800 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.1e-17 93.2 109 44.0
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.0e-16 89.4 92 43.5
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 3.0e-16 89.4 158 31.0
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 1.1e-15 87.4 88 47.7
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.5e-15 87.0 176 31.8
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 4.3e-15 85.5 88 46.6
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.6e-15 84.3 165 32.1
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-14 84.0 165 32.1
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.3e-14 84.0 165 32.1
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-14 82.4 149 33.6
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.2e-14 81.6 165 31.5
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-14 81.6 149 32.9
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.8e-13 80.1 165 31.5
CSS0023765 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.8e-13 80.1 75 52.0
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-13 80.1 119 33.6
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 1.8e-13 80.1 160 29.4
CSS0036407 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.4e-13 79.7 75 52.0
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.4e-13 79.7 92 40.2
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 2.4e-13 79.7 171 31.0
CSS0048540 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 3.1e-13 79.3 75 52.0
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-13 79.0 108 35.2
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-13 78.6 119 34.5
CSS0008763 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 9.0e-13 77.8 75 50.7
CSS0020110 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 9.0e-13 77.8 75 50.7
CSS0030884 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 9.0e-13 77.8 75 50.7
CSS0045734 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 9.0e-13 77.8 75 50.7
CSS0049005 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 9.0e-13 77.8 75 50.7
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-12 77.4 128 33.6
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-12 76.6 119 31.9
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-12 76.6 87 39.1
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-12 76.6 107 32.7
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 4.5e-12 75.5 93 40.9
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-12 75.5 88 39.8
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-12 75.1 157 30.6
CSS0021615 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.0e-11 74.3 75 46.7
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-11 73.9 107 31.8
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-11 73.6 88 37.5
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 1.7e-11 73.6 88 37.5
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.9e-11 72.8 60 51.7
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-11 72.8 90 40.0
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-11 72.0 108 33.3
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-11 72.0 88 37.5
CSS0002224 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 6.5e-11 71.6 75 49.3
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 6.5e-11 71.6 155 31.6
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 6.5e-11 71.6 170 30.6
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-11 71.2 88 38.6
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-11 71.2 91 38.5
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-10 70.5 88 37.5
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-10 69.7 88 38.6
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-10 69.3 112 32.1
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-10 68.6 88 37.5
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-10 68.6 107 29.9
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-10 68.6 88 37.5
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-10 68.2 88 36.4
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-10 68.2 88 37.5
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-10 68.2 90 32.2
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-09 67.4 88 36.4
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-09 67.4 88 34.1
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-09 67.0 119 31.1
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-09 67.0 88 35.2
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-09 66.6 89 36.0
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-09 66.2 88 36.4
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-09 65.5 88 36.4
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-08 63.5 83 37.3
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-08 63.5 91 35.2
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-08 63.2 88 35.2
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-08 61.6 65 46.2
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 1.9e-07 60.1 92 32.6
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 1.9e-07 60.1 92 39.1
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 1.9e-07 60.1 92 39.1
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 3.3e-07 59.3 92 32.6
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-07 59.3 88 33.0
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 4.3e-07 58.9 98 34.7
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 4.3e-07 58.9 98 35.7
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 4.3e-07 58.9 98 35.7
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 5.7e-07 58.5 98 35.7
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-07 58.5 74 33.8
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 7.4e-07 58.2 92 33.7
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 7.4e-07 58.2 92 33.7
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 7.4e-07 58.2 96 36.5
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 9.7e-07 57.8 120 34.2
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 9.7e-07 57.8 90 30.0


User provided reference genes

Program Settings