Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 9.0e-95 350.1 164 100.0
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 4.2e-84 314.7 162 88.9
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.1e-83 312.4 158 88.6
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.8e-82 309.3 158 88.6
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 6.7e-82 307.4 158 88.0
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 2.0e-81 305.8 160 85.0
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.7e-80 302.8 161 84.5
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 1.7e-80 302.8 161 85.7
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 3.7e-80 301.6 159 85.5
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.1e-79 298.5 161 85.1
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 5.3e-79 297.7 161 83.9
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 9.1e-79 297.0 152 88.2
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 9.1e-79 297.0 161 82.0
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 9.1e-79 297.0 161 83.2
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 2.0e-78 295.8 161 83.9
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.0e-78 295.8 161 82.6
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 2.0e-78 295.8 161 83.2
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.6e-78 295.4 161 83.2
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.6e-78 295.4 161 83.2
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.4e-78 295.0 163 79.1
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.4e-78 295.0 162 84.0
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 5.9e-78 294.3 159 81.8
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 7.7e-78 293.9 161 82.6
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 1.7e-77 292.7 159 81.8
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.7e-77 292.7 163 79.1
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 3.8e-77 291.6 160 81.2
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.1e-76 290.0 158 81.6
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.1e-76 290.0 159 82.4
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.1e-76 290.0 159 82.4
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.4e-76 289.7 162 80.2
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 1.9e-76 289.3 158 80.4
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.5e-76 288.9 158 81.0
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.5e-76 288.9 161 82.6
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 3.2e-76 288.5 161 79.5
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 3.2e-76 288.5 158 80.4
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.2e-76 288.5 161 81.4
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 4.2e-76 288.1 162 80.9
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.2e-76 288.1 159 81.8
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 7.2e-76 287.3 156 82.7
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 9.4e-76 287.0 161 79.5
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 1.2e-75 286.6 160 79.4
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.6e-75 286.2 161 78.3
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 2.1e-75 285.8 164 75.0
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.1e-75 285.8 162 80.9
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 2.7e-75 285.4 161 80.7
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 2.7e-75 285.4 155 84.5
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.6e-75 285.0 151 84.8
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 3.6e-75 285.0 161 79.5
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 4.7e-75 284.6 161 79.5
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 8.0e-75 283.9 163 75.5
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 8.0e-75 283.9 161 77.6
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 8.0e-75 283.9 161 79.5
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 8.0e-75 283.9 161 79.5
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.0e-74 283.5 154 82.5
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.4e-74 283.1 158 81.6
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.4e-74 283.1 158 81.6
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.4e-74 283.1 158 81.6
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.8e-74 282.7 161 77.0
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 75.8
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 75.2
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 3.0e-74 282.0 161 75.2
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 3.0e-74 282.0 161 75.2
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 3.9e-74 281.6 161 74.5
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 3.9e-74 281.6 162 78.4
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 5.2e-74 281.2 161 81.4
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 1.1e-73 280.0 161 74.5
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.0e-73 279.3 162 76.5
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 2.6e-73 278.9 161 74.5
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 3.3e-73 278.5 161 74.5
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 4.4e-73 278.1 161 75.8
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 5.7e-73 277.7 161 73.9
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 5.7e-73 277.7 154 79.9
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.2e-72 275.8 152 82.2
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 2.2e-72 275.8 158 77.2
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 78.3
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 2.8e-72 275.4 154 79.2
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 3.7e-72 275.0 161 73.9
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 4.8e-72 274.6 170 70.6
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 8.2e-72 273.9 152 77.6
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.1e-71 273.5 169 71.0
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 1.1e-71 273.5 160 77.5
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 1.8e-71 272.7 214 61.2
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 80.7
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 74.5
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.1e-71 271.9 162 75.9
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 2.0e-70 269.2 157 75.2
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.7e-69 266.2 158 75.3
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 2.2e-69 265.8 162 74.1
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 2.9e-69 265.4 148 83.8
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.5e-68 262.3 155 72.9
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 3.2e-68 261.9 159 73.6
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 7.2e-68 260.8 158 71.5
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 9.4e-68 260.4 161 75.8
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 6.1e-67 257.7 156 73.1
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 5.7e-65 251.1 137 81.8
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 5.7e-65 251.1 149 72.5
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 3.7e-64 248.4 156 73.1
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.6e-62 243.0 135 78.5
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.7e-62 242.3 138 77.5
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 3.5e-62 241.9 141 80.1
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 5.9e-62 241.1 135 78.5
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 3.8e-61 238.4 157 66.2
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 9.4e-60 233.8 138 76.8
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.6e-59 231.9 152 71.7
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 2.3e-58 229.2 117 88.9
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 3.4e-57 225.3 137 75.9
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 8.6e-53 210.7 183 57.4
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.3e-52 208.8 142 62.0
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 6.1e-51 204.5 116 78.4
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.4e-50 203.4 156 64.7
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.8e-50 203.0 114 77.2
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 2.3e-50 202.6 105 86.7
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.0e-50 201.8 157 56.1
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 4.0e-50 201.8 145 59.3
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 8.9e-50 200.7 121 75.2
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.7e-48 196.4 132 68.9
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 7.0e-47 191.0 114 73.7
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 3.8e-45 185.3 96 83.3
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.9e-44 183.0 95 84.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 8.3e-40 167.5 102 68.6
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.0e-37 160.6 157 53.5
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 6.6e-37 157.9 135 60.0
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 8.6e-37 157.5 132 56.8
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 9.5e-36 154.1 87 79.3
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.3e-34 149.4 85 76.5
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 8.1e-27 124.4 73 75.3
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 9.5e-20 100.9 52 84.6
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 7.6e-17 91.3 60 68.3
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.5e-09 67.0 71 46.5


User provided reference genes

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