Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 4.6e-62 241.1 129 100.0
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.7e-54 214.5 127 88.2
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 2.3e-53 212.2 127 87.4
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.0e-53 211.8 127 86.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 3.9e-53 211.5 127 85.8
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 6.7e-53 210.7 127 86.6
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 1.5e-52 209.5 127 85.0
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 3.3e-52 208.4 127 84.3
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 4.4e-52 208.0 127 84.3
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 5.7e-52 207.6 127 84.3
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 5.7e-52 207.6 127 85.0
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 5.7e-52 207.6 127 83.5
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 7.4e-52 207.2 127 85.8
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 7.4e-52 207.2 127 85.8
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.4e-52 207.2 127 83.5
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.7e-51 206.1 127 83.5
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.7e-51 206.1 126 84.1
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.7e-51 206.1 126 84.1
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 2.2e-51 205.7 127 82.7
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.2e-51 205.7 127 83.5
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.2e-51 205.7 127 83.5
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.2e-51 205.7 127 83.5
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 2.8e-51 205.3 127 82.7
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 2.8e-51 205.3 127 82.7
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 4.8e-51 204.5 127 83.5
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 6.3e-51 204.1 127 84.3
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 6.3e-51 204.1 127 82.7
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 8.2e-51 203.8 129 82.9
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 1.1e-50 203.4 127 83.5
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.4e-50 203.0 127 81.9
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.8e-50 202.6 127 81.9
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.4e-50 202.2 127 81.9
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.4e-50 202.2 127 81.9
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 3.1e-50 201.8 127 82.7
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 4.1e-50 201.4 127 82.7
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 5.3e-50 201.1 129 81.4
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 9.1e-50 200.3 127 81.1
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 9.1e-50 200.3 127 81.1
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 9.1e-50 200.3 127 81.1
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.2e-49 199.9 127 80.3
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.2e-49 199.9 129 80.6
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 1.6e-49 199.5 127 81.9
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 2.6e-49 198.7 127 80.3
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 3.5e-49 198.4 133 81.2
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 4.5e-49 198.0 127 81.1
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.9e-49 197.6 127 79.5
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 5.9e-49 197.6 127 79.5
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 5.9e-49 197.6 127 79.5
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 5.9e-49 197.6 127 78.7
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.0e-48 196.8 127 79.5
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.3e-48 196.4 127 78.7
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.3e-48 196.4 127 79.5
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 1.3e-48 196.4 126 80.2
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.7e-48 196.1 127 79.5
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.7e-48 196.1 127 78.0
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.2e-48 195.7 122 82.0
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 2.2e-48 195.7 129 79.8
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 6.5e-48 194.1 127 78.0
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.1e-47 193.4 125 79.2
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.1e-47 193.4 127 74.0
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.5e-47 193.0 127 81.9
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.5e-47 192.2 127 76.4
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 9.4e-47 190.3 127 78.0
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 1.2e-46 189.9 119 81.5
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.6e-46 189.5 126 75.4
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.7e-46 188.7 121 82.6
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 6.1e-46 187.6 127 74.8
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 6.1e-46 187.6 111 87.4
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 8.0e-46 187.2 127 77.2
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.4e-45 186.4 127 74.8
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.4e-45 186.4 127 74.8
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.4e-45 186.4 127 74.8
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.3e-45 185.7 127 76.4
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 3.0e-45 185.3 129 78.3
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.0e-45 184.9 129 76.0
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 4.0e-45 184.9 128 79.7
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 5.2e-45 184.5 127 74.8
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 5.2e-45 184.5 127 74.0
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.2e-44 183.3 127 78.7
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.2e-44 183.3 127 73.2
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.5e-44 183.0 127 73.2
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.5e-44 183.0 127 72.4
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 2.0e-44 182.6 127 72.4
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 2.2e-43 179.1 137 71.5
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.2e-43 179.1 127 73.2
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 8.2e-43 177.2 172 60.5
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 8.2e-43 177.2 119 79.8
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 1.1e-42 176.8 129 76.0
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 1.1e-42 176.8 129 76.0
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 3.1e-42 175.3 129 75.2
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 3.1e-42 175.3 119 74.8
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 3.1e-42 175.3 125 77.6
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 7.0e-42 174.1 119 76.5
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 5.9e-41 171.0 102 88.2
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.6e-38 162.9 98 85.7
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 2.6e-36 155.6 184 52.7
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 7.5e-36 154.1 99 80.8
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 2.2e-35 152.5 102 75.5
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 4.8e-35 151.4 127 59.8
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 4.8e-35 151.4 92 83.7
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 1.1e-34 150.2 127 59.1
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 5.4e-34 147.9 101 80.2
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 2.0e-33 146.0 92 83.7
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 3.5e-33 145.2 116 68.1
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 5.2e-29 131.3 92 77.2
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 1.3e-27 126.7 119 55.5
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 6.3e-27 124.4 92 75.0
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 7.0e-26 120.9 92 73.9
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 3.5e-25 118.6 93 72.0
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.9e-24 115.5 72 79.2
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.1e-23 113.6 66 89.4
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 3.3e-23 112.1 98 54.1
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 4.3e-23 111.7 107 63.6
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 5.7e-20 101.3 62 82.3
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 9.8e-20 100.5 62 79.0
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 2.9e-19 99.0 62 80.6
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 3.7e-19 98.6 63 71.4
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 5.4e-18 94.7 65 78.5
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 1.6e-17 93.2 63 76.2
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.3e-16 90.1 62 71.0
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 7.3e-15 84.3 54 83.3
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 1.4e-13 80.1 117 35.0
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 1.3e-11 73.6 119 32.8
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 6.0e-09 64.7 52 73.1
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 5.0e-08 61.6 61 47.5
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 5.0e-08 61.6 40 77.5


User provided reference genes

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