Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0094100 Rhododendron simsii HOM05D013052 ORTHO05D012831 6.0e-271 936.8 436 100.0
RhsimUnG0085000 Rhododendron simsii HOM05D013052 ORTHO05D012831 3.3e-269 931.0 436 99.3
Rhsim01G0094200 Rhododendron simsii HOM05D013052 ORTHO05D012831 7.7e-109 398.3 436 52.8
Rhsim07G0240100 Rhododendron simsii HOM05D013052 ORTHO05D012831 6.8e-57 225.7 444 38.1
Rhsim07G0240000 Rhododendron simsii HOM05D013052 ORTHO05D012831 1.7e-52 211.1 458 35.8
CSS0022059 Camellia sinensis var. sinensis HOM05D013052 ORTHO05D000378 1.9e-51 207.6 518 34.0
QL01p000349 Quercus lobata HOM05D013052 ORTHO05D012831 6.4e-39 166.0 437 32.7
QL10p008459 Quercus lobata HOM05D013052 ORTHO05D012831 8.4e-39 165.6 394 32.2
CSS0016779 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 3.6e-34 150.2 469 29.6
CSS0015488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 6.0e-29 132.9 272 35.7
QL10p008435 Quercus lobata HOM05D013052 ORTHO05D012831 4.3e-27 126.7 438 29.7
CSS0045488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 3.8e-23 113.6 275 33.5
CSS0002818 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 3.0e-20 104.0 248 33.9
Rhsim11G0021200 Rhododendron simsii HOM05D013052 ORTHO05D000007 8.4e-15 85.9 126 40.5
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 1.6e-13 81.6 183 33.9
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 4.6e-13 80.1 268 29.1
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 6.1e-13 79.7 180 32.8
CSS0022832 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 7.9e-13 79.3 261 30.3
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 1.9e-11 74.7 271 27.7
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.7e-11 73.2 267 24.3
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 7.4e-11 72.8 250 26.4
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.7e-10 70.5 266 24.1
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.8e-10 70.1 213 28.2
QL11p038460 Quercus lobata HOM05D010066 ORTHO05D009743 6.3e-10 69.7 238 29.4
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 8.2e-10 69.3 267 27.0
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-09 68.6 260 25.8
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-09 68.6 281 27.4
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.3e-09 66.6 179 29.6
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 1.5e-08 65.1 262 29.0
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 2.2e-07 61.2 273 25.3
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 3.8e-07 60.5 179 28.5
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 5.0e-07 60.1 225 29.3
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-06 58.5 193 26.9
Rhsim07G0174600 Rhododendron simsii HOM05D018855 ORTHO05D012831 3.2e-06 57.4 107 35.5
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 9.4e-06 55.8 179 29.6
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 9.4e-06 55.8 279 24.4


User provided reference genes

Program Settings