Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0084100 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.5e-89 332.8 165 100.0
Rhsim05G0147100 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.1e-14 83.2 80 55.0
Hma1.2p1_0446F.1_g154550 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.7e-14 82.8 80 55.0
Hma1.2p1_0446F.1_g154555 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.7e-14 82.8 80 55.0
RhsimUnG0192800 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.3e-13 79.7 78 46.2
Actinidia39662 Actinidia chinensis HOM05D000097 ORTHO05D000041 3.9e-13 79.0 76 52.6
Rhsim05G0010200 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.9e-13 79.0 78 46.2
Actinidia30215 Actinidia chinensis HOM05D000097 ORTHO05D000041 1.1e-12 77.4 76 50.0
Oeu060648.2 Olea europaea HOM05D000097 ORTHO05D000041 5.6e-12 75.1 80 48.8
vmacro17196 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 3.7e-11 72.4 77 46.8
Dinv10726 Davidia involucrata HOM05D000097 ORTHO05D000041 4.8e-11 72.0 76 51.3
Rhsim05G0010300 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.4e-10 69.7 76 44.7
Rhsim11G0103000 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.4e-10 69.7 76 48.7
Actinidia30217 Actinidia chinensis HOM05D000097 ORTHO05D000041 6.9e-10 68.2 76 46.1
Rhsim05G0147800 Rhododendron simsii HOM05D000097 ORTHO05D000041 9.0e-10 67.8 52 61.5
Hma1.2p1_2812F.1_g328890 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.2e-09 67.4 76 50.0
Hma1.2p1_0446F.1_g154540 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.0e-09 66.6 79 41.8
vmacro17197 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.0e-09 66.6 75 42.7
vmacro17198 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.6e-09 66.2 76 42.1
Actinidia30213 Actinidia chinensis HOM05D000097 ORTHO05D000041 3.4e-09 65.9 76 47.4
Rhsim05G0147400 Rhododendron simsii HOM05D000097 ORTHO05D000041 4.5e-09 65.5 50 66.0
Dinv03293 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-08 63.9 74 51.4
Dinv11240 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-08 63.9 74 51.4
Rhsim05G0007900 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.3e-08 63.9 76 40.8
Lj7A686G70 Lonicera japonica HOM05D000097 ORTHO05D000041 2.9e-08 62.8 78 44.9
Hma1.2p1_0560F.1_g178760 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 3.8e-08 62.4 74 43.2
Oeu060646.3 Olea europaea HOM05D000097 ORTHO05D000041 3.8e-08 62.4 79 44.3
vmacro22582 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 4.9e-08 62.0 90 38.9
Hma1.2p1_0311F.1_g121100 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 8.4e-08 61.2 63 54.0
Ah.03g148040 Amaranthus hybridus HOM05D000097 ORTHO05D000041 1.9e-07 60.1 74 44.6
Cc06_g12370 Coffea canephora HOM05D000097 ORTHO05D000041 1.9e-07 60.1 76 43.4
Dinv01673 Davidia involucrata HOM05D000097 ORTHO05D000041 1.9e-07 60.1 76 43.4
Rhsim05G0008700 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.5e-07 59.7 76 39.5
Rhsim05G0009000 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.5e-07 59.7 77 40.3
AUR62029391 Chenopodium quinoa HOM05D000097 ORTHO05D000041 3.2e-07 59.3 76 43.4
Dinv42388 Davidia involucrata HOM05D000097 ORTHO05D000041 3.2e-07 59.3 75 42.7
Cpa.g.sc28.52 Carica papaya HOM05D000097 ORTHO05D000041 4.2e-07 58.9 71 43.7
AUR62003460 Chenopodium quinoa HOM05D000097 ORTHO05D000041 4.2e-07 58.9 76 42.1
Dinv16441 Davidia involucrata HOM05D000097 ORTHO05D000041 4.2e-07 58.9 83 41.0
AUR62029394 Chenopodium quinoa HOM05D000097 ORTHO05D000041 5.5e-07 58.5 76 42.1
Migut.L01561 Erythranthe guttata HOM05D000097 ORTHO05D000041 5.5e-07 58.5 81 40.7
EL10Ac2g04359 Beta vulgaris HOM05D000097 ORTHO05D000041 7.1e-07 58.2 76 44.7
Cc06_g12350 Coffea canephora HOM05D000097 ORTHO05D000041 7.1e-07 58.2 80 42.5
Lj7C688G18 Lonicera japonica HOM05D000097 ORTHO05D000041 9.3e-07 57.8 62 48.4
Hma1.2p1_0560F.1_g178780 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.2e-06 57.4 76 44.7
Manes.11G126200 Manihot esculenta HOM05D000097 ORTHO05D000041 1.2e-06 57.4 77 36.4
Hund19270 Selenicereus undatus HOM05D000097 ORTHO05D000041 1.2e-06 57.4 76 43.4
Lju363A1T23 Lonicera japonica HOM05D000097 ORTHO05D000041 1.6e-06 57.0 76 35.5
HanXRQChr11g0353571 Helianthus annuus HOM05D000097 ORTHO05D000041 2.1e-06 56.6 80 41.2
Lj9C21T5 Lonicera japonica HOM05D000097 ORTHO05D000041 2.1e-06 56.6 76 35.5
Lju363A0T14 Lonicera japonica HOM05D000097 ORTHO05D000041 2.1e-06 56.6 76 35.5
PSO384G0330 Papaver somniferum HOM05D000097 ORTHO05D000041 2.1e-06 56.6 77 39.0
RcHm_v2.0_Chr5g0041471 Rosa chinensis HOM05D000097 ORTHO05D000041 2.1e-06 56.6 76 39.5
PSO210G3329 Papaver somniferum HOM05D000097 ORTHO05D000041 2.7e-06 56.2 174 27.6
AUR62003462 Chenopodium quinoa HOM05D000097 ORTHO05D000041 3.5e-06 55.8 76 40.8
Dinv25263 Davidia involucrata HOM05D000097 ORTHO05D000041 3.5e-06 55.8 82 43.9
Migut.J00929 Erythranthe guttata HOM05D000097 ORTHO05D000041 4.6e-06 55.5 73 42.5
Manes.05G191900 Manihot esculenta HOM05D000097 ORTHO05D000041 4.6e-06 55.5 76 36.8
Manes.S095204 Manihot esculenta HOM05D000097 ORTHO05D000041 4.6e-06 55.5 77 35.1
SGA_v2.0_scaffold37G14580 Striga asiatica HOM05D000097 ORTHO05D000041 4.6e-06 55.5 76 38.2
TAR383G0033 Trochodendron aralioides HOM05D000097 ORTHO05D000041 4.6e-06 55.5 76 39.5
HanXRQChr11g0353601 Helianthus annuus HOM05D000097 ORTHO05D000041 6.0e-06 55.1 80 40.0
Rhsim11G0103100 Rhododendron simsii HOM05D000097 ORTHO05D000041 6.0e-06 55.1 104 39.4
RcHm_v2.0_Chr5g0045281 Rosa chinensis HOM05D000097 ORTHO05D000041 6.0e-06 55.1 76 36.8
Hma1.2p1_0560F.1_g178800 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 7.9e-06 54.7 76 39.5
PSO210G7052 Papaver somniferum HOM05D000097 ORTHO05D000041 7.9e-06 54.7 75 37.3
Prupe.6G131600 Prunus persica HOM05D000097 ORTHO05D000041 7.9e-06 54.7 74 40.5


User provided reference genes

Program Settings