Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0060400 Rhododendron simsii HOM05D003121 ORTHO05D003535 1.5e-87 326.2 172 100.0
vmacro13056 Vaccinium macrocarpon HOM05D003121 ORTHO05D003535 5.1e-24 115.2 181 45.9
Rhsim01G0025300 Rhododendron simsii HOM05D003121 ORTHO05D003535 5.7e-23 111.7 180 45.0
Dinv40527 Davidia involucrata HOM05D003121 ORTHO05D003535 3.3e-15 85.9 180 38.9
Actinidia39167 Actinidia chinensis HOM05D003121 ORTHO05D003535 1.3e-14 84.0 192 37.5
Dinv41919 Davidia involucrata HOM05D003121 ORTHO05D003535 3.7e-14 82.4 186 36.6
Actinidia32029 Actinidia chinensis HOM05D003121 ORTHO05D003535 3.1e-13 79.3 181 38.7
Actinidia21476 Actinidia chinensis HOM05D003121 ORTHO05D003535 1.2e-12 77.4 170 38.8
Hma1.2p1_0032F.1_g019220 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 3.4e-12 75.9 181 37.6
CSS0021302 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 7.7e-12 74.7 177 37.9
Hma1.2p1_0163F.1_g072700 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 3.8e-11 72.4 181 36.5
Nitab4.5_0000563g0090 Nicotiana tabacum HOM05D003121 ORTHO05D003535 6.5e-11 71.6 184 35.3
Nitab4.5_0002341g0030 Nicotiana tabacum HOM05D003121 ORTHO05D003535 1.1e-10 70.9 184 35.3
TAR625G0403 Trochodendron aralioides HOM05D003121 ORTHO05D003535 2.5e-10 69.7 180 33.3
CsaV3_7G001220 Cucumis sativus L. HOM05D003121 ORTHO05D003535 4.2e-10 68.9 185 34.1
Prupe.8G168900 Prunus persica HOM05D003121 ORTHO05D003535 5.5e-10 68.6 178 34.3
GSVIVG01037045001 Vitis vinifera HOM05D003121 ORTHO05D003535 5.5e-10 68.6 173 35.3
PGR042G3155 Punica granatum HOM05D003121 ORTHO05D003535 1.2e-09 67.4 177 33.9
Cc09_g10310 Coffea canephora HOM05D003121 ORTHO05D003535 2.7e-09 66.2 183 34.4
Migut.N01332 Erythranthe guttata HOM05D003121 ORTHO05D003535 3.6e-09 65.9 180 31.7
QL11p052350 Quercus lobata HOM05D003121 ORTHO05D003535 4.7e-09 65.5 179 34.1
MSTRG.27630 Avicennia marina HOM05D003121 ORTHO05D003535 6.1e-09 65.1 179 30.7
FvH4_2g15640 Fragaria vesca HOM05D003121 ORTHO05D003535 6.1e-09 65.1 178 34.8
FAN20G1288 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.1e-09 65.1 178 34.8
FAN24G0024 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.1e-09 65.1 178 34.8
PGSC0003DMG401001724 Solanum tuberosum HOM05D003121 ORTHO05D003535 6.1e-09 65.1 181 35.4
Haze_00809 Corylus avellana HOM05D003121 ORTHO05D003535 8.0e-09 64.7 178 34.8
Sopen01g035570 Solanum pennellii HOM05D003121 ORTHO05D003535 8.0e-09 64.7 181 35.4
TAR376G0768 Trochodendron aralioides HOM05D003121 ORTHO05D003535 8.0e-09 64.7 182 33.0
Gohir.D01G161400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 1.0e-08 64.3 178 33.1
Gorai.002G200100 Gossypium raimondii HOM05D003121 ORTHO05D003535 1.0e-08 64.3 178 33.1
Manes.15G059200 Manihot esculenta HOM05D003121 ORTHO05D003535 1.0e-08 64.3 174 32.8
Solyc01g088730.3 Solanum lycopersicum HOM05D003121 ORTHO05D003535 1.0e-08 64.3 181 35.4
CAN.G756.31 Capsicum annuum HOM05D003121 ORTHO05D003535 2.3e-08 63.2 180 34.4
CiPaw.02G071300 Carya illinoinensis HOM05D003121 ORTHO05D003535 2.3e-08 63.2 178 33.7
Thecc.02G055800 Theobroma cacao HOM05D003121 ORTHO05D003535 2.3e-08 63.2 180 31.1
ClCG02G003910 Citrullus lanatus HOM05D003121 ORTHO05D003535 3.9e-08 62.4 179 34.1
Duzib052G0361 Durio zibethinus HOM05D003121 ORTHO05D003535 5.2e-08 62.0 173 31.8
MELO3C013333.2 Cucumis melo HOM05D003121 ORTHO05D003535 1.1e-07 60.8 185 32.4
Carub.0006s2137 Capsella rubella HOM05D003121 ORTHO05D003535 2.0e-07 60.1 179 31.8
Sed0021457 Sechium edule HOM05D003121 ORTHO05D003535 2.0e-07 60.1 185 29.2
Aa31LG10G14410 Aethionema arabicum HOM05D003121 ORTHO05D003535 2.6e-07 59.7 180 31.7
Lalb_Chr06g0163731 Lupinus albus HOM05D003121 ORTHO05D003535 2.6e-07 59.7 168 33.9
MBI07_g07805_MAGBIO Magnolia biondii HOM05D003121 ORTHO05D003535 2.6e-07 59.7 171 32.2
RcHm_v2.0_Chr6g0278841 Rosa chinensis HOM05D003121 ORTHO05D003535 2.6e-07 59.7 178 33.1
Lj5P177T42 Lonicera japonica HOM05D003121 ORTHO05D003535 3.3e-07 59.3 118 39.0
Ciclev10030221m.g Citrus clementina HOM05D003121 ORTHO05D003535 4.4e-07 58.9 174 32.8
COL.COLO4_17374 Corchorus olitorius HOM05D003121 ORTHO05D003535 4.4e-07 58.9 184 32.6
Gohir.A01G170400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 4.4e-07 58.9 178 31.5
THA.LOC104819658 Tarenaya hassleriana HOM05D003121 ORTHO05D003535 4.4e-07 58.9 173 32.4
CARHR189980 Cardamine hirsuta HOM05D003121 ORTHO05D003535 5.7e-07 58.5 179 31.8
MD05G1124900 Malus domestica HOM05D003121 ORTHO05D003535 7.4e-07 58.2 186 32.8
Peaxi162Scf00793g00345 Petunia axillaris HOM05D003121 ORTHO05D003535 9.7e-07 57.8 183 32.2
Medtr1g112910 Medicago truncatula HOM05D003121 ORTHO05D003535 2.2e-06 56.6 182 30.8
AT5G23590 Arabidopsis thaliana HOM05D003121 ORTHO05D003535 2.8e-06 56.2 179 30.2
Hund00013 Selenicereus undatus HOM05D003121 ORTHO05D003535 6.3e-06 55.1 177 31.6


User provided reference genes

Program Settings