Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 1.4e-90 336.3 174 100.0
vmacro21889 Vaccinium macrocarpon HOM05D007673 ORTHO05D009278 1.8e-29 133.3 211 46.0
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 5.4e-29 131.7 184 48.4
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 7.5e-23 111.3 186 45.2
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 2.8e-22 109.4 184 41.3
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 6.3e-22 108.2 188 43.6
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 6.3e-22 108.2 174 43.7
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 1.8e-21 106.7 186 40.3
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 3.1e-21 105.9 169 42.6
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 2.0e-20 103.2 183 38.3
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.3e-19 100.5 190 43.2
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 1.7e-19 100.1 185 41.1
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 1.8e-16 90.1 182 36.8
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 1.8e-16 90.1 191 37.2
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 3.0e-16 89.4 187 38.5
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 3.4e-15 85.9 187 39.0
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 3.4e-15 85.9 186 38.7
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 7.5e-15 84.7 188 35.1
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 2.2e-14 83.2 111 45.0
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 4.9e-14 82.0 123 40.7
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 6.4e-14 81.6 109 47.7
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 1.8e-13 80.1 183 35.5
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 1.8e-13 80.1 109 45.9
CAN.G877.9 Capsicum annuum HOM05D007673 ORTHO05D009278 4.1e-13 79.0 197 32.0
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 4.1e-13 79.0 177 36.7
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 4.1e-13 79.0 186 36.6
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 5.4e-13 78.6 147 37.4
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 9.2e-13 77.8 185 33.5
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 3.5e-12 75.9 187 36.4
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 7.8e-12 74.7 185 34.1
Nitab4.5_0008829g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 3.0e-11 72.8 142 37.3
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 1.5e-10 70.5 189 34.9
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 4.3e-10 68.9 182 34.6
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 5.6e-10 68.6 192 35.4
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 5.6e-10 68.6 176 33.5
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 5.6e-10 68.6 197 33.0
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 2.8e-09 66.2 180 33.9
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 3.6e-09 65.9 131 38.9
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 6.2e-09 65.1 177 35.0
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 1.8e-08 63.5 175 30.9
Peaxi162Scf00108g00316 Petunia axillaris HOM05D007673 ORTHO05D009278 3.1e-08 62.8 189 35.4
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 6.8e-08 61.6 175 32.0
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 1.5e-07 60.5 153 35.9
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 1.5e-07 60.5 118 35.6
DCAR_014921 Daucus carota HOM05D007673 ORTHO05D009278 2.6e-07 59.7 85 45.9
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 2.6e-07 59.7 102 43.1
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 5.8e-07 58.5 179 31.3
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 7.5e-07 58.2 189 31.7
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 7.5e-07 58.2 189 31.7
HanXRQChr12g0357101 Helianthus annuus HOM05D030613 ORTHO05D029296 7.5e-07 58.2 178 32.0
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 7.5e-07 58.2 184 34.2
DCAR_017766 Daucus carota HOM05D007673 ORTHO05D009278 9.8e-07 57.8 96 44.8
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 9.8e-07 57.8 176 31.8
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 1.3e-06 57.4 179 33.0
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 1.7e-06 57.0 93 41.9
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 1.7e-06 57.0 191 27.7
ECA240G3592 Erigeron canadensis HOM05D007673 ORTHO05D009278 2.2e-06 56.6 89 46.1
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 2.9e-06 56.2 179 29.6
Migut.K00385 Erythranthe guttata HOM05D007673 ORTHO05D009278 3.7e-06 55.8 68 50.0
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 3.7e-06 55.8 105 41.9
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 4.9e-06 55.5 177 31.1
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 4.9e-06 55.5 86 45.3
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 4.9e-06 55.5 103 42.7
EL10Ac8g18805 Beta vulgaris HOM05D022392 ORTHO05D009278 8.3e-06 54.7 99 41.4


User provided reference genes

Program Settings