Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0050000 Rhododendron simsii HOM05D016725 ORTHO05D003125 2.6e-138 495.4 247 100.0
Rhsim01G0050100 Rhododendron simsii HOM05D016725 ORTHO05D003125 8.1e-47 191.4 103 92.2
Rhsim01G0052800 Rhododendron simsii HOM05D016725 ORTHO05D003125 6.4e-44 181.8 104 87.5
Rhsim01G0052600 Rhododendron simsii HOM05D016725 ORTHO05D003125 8.1e-31 138.3 67 92.5
Rhsim01G0053000 Rhododendron simsii HOM05D016725 ORTHO05D003125 5.6e-24 115.5 61 93.4
Rhsim01G0049900 Rhododendron simsii HOM05D016725 ORTHO05D003125 8.1e-23 111.7 59 93.2
Rhsim01G0052500 Rhododendron simsii HOM05D016725 ORTHO05D003125 3.1e-22 109.8 76 76.3
Rhsim01G0052700 Rhododendron simsii HOM05D016725 ORTHO05D003125 2.0e-21 107.1 53 92.5
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 1.2e-18 97.8 99 56.6
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 5.9e-13 79.0 218 32.6
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.2e-12 77.0 118 42.4
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.2e-12 77.0 118 42.4
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 4.2e-11 72.8 135 38.5
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 1.2e-10 71.2 118 41.5
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 6.1e-10 68.9 127 40.9
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 6.1e-10 68.9 127 40.9
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.0e-09 68.2 83 48.2
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.0e-09 68.2 120 42.5
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 1.8e-09 67.4 75 50.7
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.9e-09 66.2 76 48.7
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 3.9e-09 66.2 116 41.4
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 5.1e-09 65.9 82 47.6
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 8.7e-09 65.1 83 47.0
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.1e-08 64.7 140 35.0
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.1e-08 64.7 118 38.1
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.5e-08 64.3 87 46.0
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 1.9e-08 63.9 91 46.2
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 3.3e-08 63.2 80 45.0
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 3.3e-08 63.2 79 50.6
Aqoxy7G00610 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 4.3e-08 62.8 65 49.2
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 4.3e-08 62.8 86 47.7
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.3e-08 62.8 93 49.5
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.3e-08 62.8 82 46.3
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.3e-08 62.8 82 46.3
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 5.7e-08 62.4 124 37.1
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 5.7e-08 62.4 125 36.8
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 7.4e-08 62.0 116 37.1
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 9.7e-08 61.6 88 46.6
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 9.7e-08 61.6 79 51.9
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.2e-07 60.5 91 45.1
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 2.2e-07 60.5 86 40.7
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 2.8e-07 60.1 86 40.7
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 2.8e-07 60.1 85 41.2
CAN.G551.21 Capsicum annuum HOM05D003969 ORTHO05D003125 3.7e-07 59.7 112 33.9
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 3.7e-07 59.7 64 54.7
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 4.8e-07 59.3 87 46.0
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 4.8e-07 59.3 73 47.9
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 4.8e-07 59.3 113 32.7
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 8.2e-07 58.5 73 46.6
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 8.2e-07 58.5 123 30.9
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.1e-06 58.2 111 35.1
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 1.8e-06 57.4 72 47.2
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 1.8e-06 57.4 79 48.1
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 1.8e-06 57.4 86 43.0
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 1.8e-06 57.4 76 42.1
Actinidia23308 Actinidia chinensis HOM05D003969 ORTHO05D003125 2.4e-06 57.0 73 47.9
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 3.1e-06 56.6 68 45.6
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 3.1e-06 56.6 107 38.3
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 4.1e-06 56.2 117 39.3
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 4.1e-06 56.2 85 41.2
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 5.3e-06 55.8 81 48.1
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 5.3e-06 55.8 70 44.3
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 5.3e-06 55.8 66 48.5
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 6.9e-06 55.5 79 41.8
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 6.9e-06 55.5 106 37.7
HPP92_020075 Vanilla planifolia HOM05D003969 ORTHO05D003125 6.9e-06 55.5 63 50.8
HPP92_023807 Vanilla planifolia HOM05D003969 ORTHO05D003125 6.9e-06 55.5 104 34.6
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 9.0e-06 55.1 112 37.5


User provided reference genes

Program Settings