Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0048500 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.6e-173 610.9 325 100.0
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.3e-129 466.8 317 76.7
Rhsim06G0241200 Rhododendron simsii HOM05D010265 ORTHO05D009356 3.4e-117 425.6 259 85.3
Rhsim13G0191800 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.6e-106 390.2 224 90.2
Rhsim01G0138200 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.9e-104 383.3 224 88.4
Rhsim12G0140100 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.7e-90 336.3 244 72.1
RhsimUnG0000500 Rhododendron simsii HOM05D010265 ORTHO05D009356 6.6e-89 331.6 231 77.5
Rhsim01G0085700 Rhododendron simsii HOM05D010265 ORTHO05D009356 8.6e-81 304.7 172 90.7
Rhsim05G0211800 Rhododendron simsii HOM05D010265 ORTHO05D009356 6.8e-78 295.0 244 67.6
Rhsim08G0243500 Rhododendron simsii HOM05D010265 ORTHO05D009356 3.3e-72 276.2 211 69.7
Rhsim11G0056900 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.6e-55 220.7 170 69.4
Rhsim05G0208300 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.3e-54 215.7 118 92.4
Rhsim13G0074200 Rhododendron simsii HOM05D010265 ORTHO05D009356 6.9e-54 215.3 147 74.1
Rhsim05G0211700 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.9e-44 183.3 235 51.1
RhsimUnG0038800 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.1e-35 154.8 82 95.1
Rhsim03G0183200 Rhododendron simsii HOM05D000071 ORTHO05D000029 3.2e-35 153.3 92 88.0
Rhsim13G0151300 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.1e-27 128.3 134 53.0
Rhsim12G0081100 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.1e-25 119.4 73 76.7
vmacro02192 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 1.4e-22 111.3 209 36.8
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 1.2e-21 108.2 188 38.3
RhsimUnG0085900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-20 105.1 193 40.4
Rhsim01G0234900 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.4e-19 101.3 203 36.9
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.4e-19 101.3 191 37.2
Rhsim05G0007500 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.2e-19 99.8 179 37.4
RhsimUnG0075300 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.4e-19 98.6 128 48.4
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.1e-18 97.4 356 28.1
Rhsim08G0017800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-18 97.1 179 38.5
RhsimUnG0053300 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.7e-18 96.3 134 45.5
Rhsim11G0186100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.4e-17 94.7 298 30.9
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.8e-17 92.0 193 34.2
Rhsim09G0039900 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.8e-17 92.0 351 28.2
Rhsim04G0035700 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-16 91.7 134 45.5
RhsimUnG0177800 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-16 91.7 134 45.5
Rhsim09G0015100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.5e-16 91.3 290 29.0
Rhsim02G0102300 Rhododendron simsii HOM05D000030 ORTHO05D000031 7.4e-16 89.0 292 28.8
Rhsim05G0212200 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.1e-14 83.6 125 43.2
vmacro11329 Vaccinium macrocarpon HOM05D010265 ORTHO05D051532 2.6e-13 80.5 235 32.8
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.2e-12 77.4 365 24.9
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.0e-12 76.3 359 24.2
RhsimUnG0151500 Rhododendron simsii HOM05D017214 ORTHO05D018100 3.2e-11 73.6 201 31.3
Rhsim09G0050400 Rhododendron simsii HOM05D017214 ORTHO05D018100 3.6e-10 70.1 190 30.0
RhsimUnG0176300 Rhododendron simsii HOM05D000026 ORTHO05D000127 8.0e-10 68.9 214 30.8
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.4e-09 68.2 311 23.5
Rhsim09G0077300 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.2e-09 66.2 298 26.5
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.2e-08 65.1 42 69.0
Rhsim12G0072300 Rhododendron simsii HOM05D000061 ORTHO05D000050 2.6e-08 63.9 58 58.6
Rhsim02G0131300 Rhododendron simsii HOM05D029833 ORTHO05D009356 7.5e-08 62.4 171 30.4
Rhsim07G0051900 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.5e-08 62.4 173 35.8
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 1.3e-07 61.6 186 30.6
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.2e-07 60.8 281 29.2
Rhsim11G0108900 Rhododendron simsii HOM05D017214 ORTHO05D018100 3.7e-07 60.1 120 36.7
Rhsim11G0006600 Rhododendron simsii HOM05D008219 ORTHO05D018100 4.1e-06 56.6 289 25.6


User provided reference genes

Program Settings