Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0032300 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.3e-116 420.2 215 100.0
Rhsim01G0030100 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.0e-98 363.6 221 87.3
Rhsim01G0030600 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.6e-59 232.3 179 72.6
Rhsim01G0032600 Rhododendron simsii HOM05D001219 ORTHO05D001017 7.5e-57 224.6 180 70.0
Rhsim01G0015200 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.0e-54 216.5 168 67.3
Rhsim01G0029400 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.4e-50 203.8 155 65.8
Rhsim01G0032900 Rhododendron simsii HOM05D001219 ORTHO05D001017 4.1e-47 192.2 162 63.6
Rhsim01G0032200 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.0e-41 173.3 149 61.7
Rhsim01G0031800 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.6e-41 172.9 124 76.6
Rhsim01G0031200 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.8e-41 171.0 172 57.6
Rhsim01G0031300 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.4e-39 167.2 119 69.7
Rhsim01G0030000 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.6e-38 163.7 145 60.7
Rhsim12G0117900 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.6e-38 163.7 125 66.4
Rhsim01G0030500 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.1e-38 163.3 148 57.4
Rhsim01G0030400 Rhododendron simsii HOM05D001219 ORTHO05D001017 4.6e-38 162.2 173 53.2
Rhsim01G0030300 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.7e-37 160.2 145 57.9
Rhsim01G0032000 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.7e-37 160.2 126 65.1
Rhsim01G0029500 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.9e-37 159.1 205 49.3
Rhsim01G0030200 Rhododendron simsii HOM05D001219 ORTHO05D001017 6.6e-37 158.3 126 65.1
Rhsim01G0029900 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.5e-36 157.1 173 52.0
Rhsim01G0082800 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.5e-36 157.1 126 64.3
Rhsim01G0030800 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.8e-35 152.9 139 59.0
Rhsim01G0031000 Rhododendron simsii HOM05D001219 ORTHO05D001017 6.8e-34 148.3 106 71.7
Rhsim01G0032800 Rhododendron simsii HOM05D001219 ORTHO05D001017 6.8e-34 148.3 173 48.6
Rhsim01G0029600 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.6e-30 137.1 144 53.5
Rhsim01G0029800 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.1e-30 136.7 111 64.9
Rhsim01G0029300 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.9e-29 132.5 100 67.0
Rhsim02G0048100 Rhododendron simsii HOM05D001219 ORTHO05D001017 4.3e-28 129.0 98 68.4
Rhsim04G0152300 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.8e-27 126.3 148 51.4
Rhsim01G0029700 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.4e-26 123.2 167 46.7
Rhsim01G0030700 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.4e-26 123.2 281 35.6
Rhsim01G0030900 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.4e-26 123.2 167 46.7
Rhsim01G0032100 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.8e-24 115.9 168 44.0
Rhsim01G0031600 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.3e-23 111.3 98 60.2
RhsimUnG0227200 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.3e-21 106.7 92 59.8
Rhsim02G0048200 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.0e-21 106.3 99 54.5
AUR62013441 Chenopodium quinoa HOM05D001219 ORTHO05D001017 7.3e-20 101.7 158 37.3
Rhsim01G0032400 Rhododendron simsii HOM05D001219 ORTHO05D001017 8.1e-19 98.2 89 61.8
Phvul.010G159200 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 3.1e-18 96.3 167 37.1
Lj3g0020556 Lotus japonicus HOM05D001219 ORTHO05D001017 4.0e-18 95.9 174 34.5
Lj9P496T46 Lonicera japonica HOM05D001219 ORTHO05D001017 1.5e-17 94.0 189 31.2
VMungo0331G0655 Vigna mungo HOM05D001219 ORTHO05D001017 2.6e-17 93.2 167 35.9
TPR.G6402 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-17 92.8 170 34.1
Nn8g39731 Nelumbo nucifera HOM05D001219 ORTHO05D001017 4.5e-17 92.4 208 30.3
AUR62007700 Chenopodium quinoa HOM05D001219 ORTHO05D001017 2.2e-16 90.1 151 35.8
Lalb_Chr01g0012921 Lupinus albus HOM05D001219 ORTHO05D001017 2.9e-16 89.7 204 30.4
Rhsim01G0031400 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.8e-16 89.4 128 42.2
Ca_20557_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 4.9e-16 89.0 171 33.3
Ca_30909_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 4.9e-16 89.0 171 33.3
Glyma.08G216300 Glycine max HOM05D001219 ORTHO05D001017 4.9e-16 89.0 153 33.3
Psat7g258720 Pisum sativum HOM05D001219 ORTHO05D001017 8.4e-16 88.2 171 35.1
TPR.G38777 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-15 87.8 168 32.1
Medtr5g088250 Medicago truncatula HOM05D001219 ORTHO05D001017 1.4e-15 87.4 170 31.2
Lj3g0021602 Lotus japonicus HOM05D001219 ORTHO05D001017 2.4e-15 86.7 151 33.8
Medtr3g465770 Medicago truncatula HOM05D001219 ORTHO05D001017 2.4e-15 86.7 155 34.8
Medtr4g009030 Medicago truncatula HOM05D001219 ORTHO05D001017 3.2e-15 86.3 151 33.8
Phvul.010G159100 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 3.2e-15 86.3 153 32.7
Rhsim01G0031500 Rhododendron simsii HOM05D001219 ORTHO05D001017 7.1e-15 85.1 61 68.9
arahy.Tifrunner.gnm1.ann1.F6HDT7 Arachis hypogaea HOM05D001219 ORTHO05D001017 1.2e-14 84.3 148 34.5
Ca_04901_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.2e-14 84.3 173 31.2
Medtr8g076010 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-14 84.3 163 35.0
TPR.G18440 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-14 84.3 146 36.3
arahy.Tifrunner.gnm1.ann1.JW8Z9M Arachis hypogaea HOM05D001219 ORTHO05D001017 2.1e-14 83.6 148 34.5
TPR.G16396 Trifolium pratense HOM05D001219 ORTHO05D001017 2.1e-14 83.6 176 33.5
arahy.Tifrunner.gnm1.ann1.P2NKR4 Arachis hypogaea HOM05D001219 ORTHO05D001017 2.7e-14 83.2 148 33.1
TPR.G31141 Trifolium pratense HOM05D001219 ORTHO05D001017 2.7e-14 83.2 141 37.6
COL.COLO4_26644 Corchorus olitorius HOM05D001219 ORTHO05D001017 3.5e-14 82.8 170 34.1
Psat3g054040 Pisum sativum HOM05D001219 ORTHO05D001017 4.6e-14 82.4 192 29.7
COL.COLO4_20760 Corchorus olitorius HOM05D001219 ORTHO05D001017 6.0e-14 82.0 172 29.7
Psat3g054120 Pisum sativum HOM05D001219 ORTHO05D001017 6.0e-14 82.0 192 29.2
Psat7g258680 Pisum sativum HOM05D001219 ORTHO05D001017 1.3e-13 80.9 153 33.3
vmacro12363 Vaccinium macrocarpon HOM05D001219 ORTHO05D001017 1.3e-13 80.9 192 30.2
COL.COLO4_08738 Corchorus olitorius HOM05D001219 ORTHO05D001017 2.3e-13 80.1 178 27.5
Hma1.2p1_0135F.1_g061780 Hydrangea macrophylla HOM05D001219 ORTHO05D001017 2.3e-13 80.1 172 32.0
Psat0s538g0040 Pisum sativum HOM05D001219 ORTHO05D001017 2.3e-13 80.1 173 32.4
Thhalv10018340m.g Eutrema salsugineum HOM05D001219 ORTHO05D001017 3.0e-13 79.7 186 31.7
Psat3g051760 Pisum sativum HOM05D001219 ORTHO05D001017 3.0e-13 79.7 182 30.8
TPR.G29733 Trifolium pratense HOM05D001219 ORTHO05D001017 3.0e-13 79.7 152 30.9
C06p53900 Brassica napus HOM05D001219 ORTHO05D001017 3.9e-13 79.3 179 29.1
BolC6t40404H Brassica oleracea HOM05D001219 ORTHO05D001017 3.9e-13 79.3 168 31.5
COL.COLO4_31467 Corchorus olitorius HOM05D001219 ORTHO05D001017 3.9e-13 79.3 180 25.6
TPR.G29719 Trifolium pratense HOM05D001219 ORTHO05D001017 3.9e-13 79.3 158 34.2
TPR.G29931 Trifolium pratense HOM05D001219 ORTHO05D001017 3.9e-13 79.3 171 30.4
COL.COLO4_31329 Corchorus olitorius HOM05D001219 ORTHO05D001017 5.1e-13 79.0 196 24.5
TPR.G18387 Trifolium pratense HOM05D001219 ORTHO05D001017 5.1e-13 79.0 114 39.5
Medtr4g006240 Medicago truncatula HOM05D001219 ORTHO05D001017 6.7e-13 78.6 157 31.8
Medtr4g008340 Medicago truncatula HOM05D001219 ORTHO05D001017 6.7e-13 78.6 170 27.1
Medtr4g019320 Medicago truncatula HOM05D001219 ORTHO05D001017 6.7e-13 78.6 168 31.5
Psat3g054360 Pisum sativum HOM05D001219 ORTHO05D001017 6.7e-13 78.6 155 33.5
PGR102G0655 Punica granatum HOM05D001219 ORTHO05D001017 6.7e-13 78.6 171 32.7
THA.LOC104812449 Tarenaya hassleriana HOM05D001219 ORTHO05D001017 6.7e-13 78.6 168 32.1
A07p45070 Brassica napus HOM05D001219 ORTHO05D001017 8.7e-13 78.2 168 31.0
Thecc.06G037000 Theobroma cacao HOM05D001219 ORTHO05D001017 1.1e-12 77.8 168 32.7
TPR.G15122 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-12 77.4 144 33.3
EL10Ac7g16765 Beta vulgaris HOM05D001219 ORTHO05D001017 1.9e-12 77.0 171 31.0
TPR.G29730 Trifolium pratense HOM05D001219 ORTHO05D001017 1.9e-12 77.0 200 31.5
Cfa001905 Carpinus fangiana HOM05D001219 ORTHO05D001017 2.5e-12 76.6 112 38.4
Lalb_Chr25g0279201 Lupinus albus HOM05D001219 ORTHO05D001017 2.5e-12 76.6 144 31.9
Sp5g35130 Schrenkiella parvula HOM05D001219 ORTHO05D001017 3.3e-12 76.3 171 33.3
arahy.Tifrunner.gnm1.ann1.6H8B8Z Arachis hypogaea HOM05D001219 ORTHO05D001017 4.3e-12 75.9 183 31.7
arahy.Tifrunner.gnm1.ann1.T7YMEL Arachis hypogaea HOM05D001219 ORTHO05D001017 4.3e-12 75.9 122 36.9
TPR.G15180 Trifolium pratense HOM05D001219 ORTHO05D001017 5.6e-12 75.5 173 31.2
QL05p034226 Quercus lobata HOM05D001219 ORTHO05D001017 7.4e-12 75.1 108 38.0
COL.COLO4_31198 Corchorus olitorius HOM05D001219 ORTHO05D001017 9.6e-12 74.7 125 32.0
Lj3g0011098 Lotus japonicus HOM05D001219 ORTHO05D001017 1.3e-11 74.3 167 31.1
TPR.G29721 Trifolium pratense HOM05D001219 ORTHO05D001017 1.6e-11 73.9 152 34.2
Eucgr.E01273 Eucalyptus grandis HOM05D001219 ORTHO05D001017 2.1e-11 73.6 160 29.4
Ca_06859_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 3.6e-11 72.8 155 32.3
Psat3g054200 Pisum sativum HOM05D001219 ORTHO05D001017 3.6e-11 72.8 144 32.6
AL2G40810 Arabidopsis lyrata HOM05D001219 ORTHO05D001017 4.8e-11 72.4 168 32.1
COL.COLO4_31487 Corchorus olitorius HOM05D000300 ORTHO05D000383 8.1e-11 71.6 170 24.7
arahy.Tifrunner.gnm1.ann1.158PZX Arachis hypogaea HOM05D001219 ORTHO05D001017 1.1e-10 71.2 183 31.1
arahy.Tifrunner.gnm1.ann1.2CLR18 Arachis hypogaea HOM05D001219 ORTHO05D001017 1.1e-10 71.2 183 31.1
arahy.Tifrunner.gnm1.ann1.8PP8TY Arachis hypogaea HOM05D001219 ORTHO05D001017 1.1e-10 71.2 183 31.1
Carub.0002s2711 Capsella rubella HOM05D001219 ORTHO05D001017 1.1e-10 71.2 168 32.1
Cpa.g.sc10.120 Carica papaya HOM05D001219 ORTHO05D001017 1.1e-10 71.2 168 28.6
Medtr6g027420 Medicago truncatula HOM05D001219 ORTHO05D001017 1.1e-10 71.2 171 34.5
Atru.chr10.2383 Acer truncatum HOM05D001219 ORTHO05D001017 1.4e-10 70.9 170 27.6
TPR.G22352 Trifolium pratense HOM05D001219 ORTHO05D001017 1.4e-10 70.9 151 33.1
DCAR_016287 Daucus carota HOM05D001219 ORTHO05D001017 1.8e-10 70.5 192 30.2
AT1G80630 Arabidopsis thaliana HOM05D001219 ORTHO05D001017 2.4e-10 70.1 166 31.9
ClCG09G003210 Citrullus lanatus HOM05D001219 ORTHO05D001017 3.1e-10 69.7 108 37.0
Ca_07189_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 4.0e-10 69.3 155 31.6
TPR.G37654 Trifolium pratense HOM05D001219 ORTHO05D001017 4.0e-10 69.3 174 29.3
TWI12G1478 Tripterygium wilfordii HOM05D001219 ORTHO05D001017 4.0e-10 69.3 203 25.6
BraA07t32010Z Brassica rapa HOM05D001219 ORTHO05D001017 9.0e-10 68.2 121 36.4
TPR.G15124 Trifolium pratense HOM05D001219 ORTHO05D001017 9.0e-10 68.2 168 28.6
TWI75G0494 Tripterygium wilfordii HOM05D001219 ORTHO05D001017 9.0e-10 68.2 186 28.0
Medtr5g087540 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-09 67.4 109 36.7
Sc25g0001140 Simmondsia chinensis HOM05D001219 ORTHO05D001017 1.5e-09 67.4 136 30.1
arahy.Tifrunner.gnm1.ann1.VNVE4D Arachis hypogaea HOM05D001219 ORTHO05D001017 2.0e-09 67.0 190 30.0
Psat3g055240 Pisum sativum HOM05D001219 ORTHO05D001017 2.6e-09 66.6 127 31.5
arahy.Tifrunner.gnm1.ann1.J2ILTU Arachis hypogaea HOM05D001219 ORTHO05D001017 3.4e-09 66.2 188 32.4
Medtr1g115380 Medicago truncatula HOM05D001219 ORTHO05D001017 3.4e-09 66.2 181 28.7
TPR.G29734 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-09 66.2 170 31.2
arahy.Tifrunner.gnm1.ann1.NR23UA Arachis hypogaea HOM05D001219 ORTHO05D001017 4.5e-09 65.9 195 29.7
TPR.G29726 Trifolium pratense HOM05D001219 ORTHO05D001017 4.5e-09 65.9 106 36.8
CsaV3_7G032020 Cucumis sativus L. HOM05D001219 ORTHO05D001017 5.8e-09 65.5 105 41.0
DCAR_016288 Daucus carota HOM05D001219 ORTHO05D001017 5.8e-09 65.5 199 28.6
Medtr4g024220 Medicago truncatula HOM05D001219 ORTHO05D001017 7.6e-09 65.1 150 32.7
Medtr1g050478 Medicago truncatula HOM05D001219 ORTHO05D001017 9.9e-09 64.7 119 31.9
Medtr3g006050 Medicago truncatula HOM05D001219 ORTHO05D001017 9.9e-09 64.7 108 36.1
RhsimUnG0244400 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.9e-09 64.7 170 28.8
Aa31LG4G910 Aethionema arabicum HOM05D001219 ORTHO05D001017 1.3e-08 64.3 171 29.2
TPR.G9338 Trifolium pratense HOM05D001219 ORTHO05D001017 1.3e-08 64.3 178 28.7
Medtr3g073390 Medicago truncatula HOM05D001219 ORTHO05D001017 1.7e-08 63.9 148 30.4
Sed0011616 Sechium edule HOM05D001219 ORTHO05D001017 1.7e-08 63.9 174 29.3
MELO3C023455.2 Cucumis melo HOM05D001219 ORTHO05D001017 2.2e-08 63.5 102 38.2
Lj3g0021238 Lotus japonicus HOM05D001219 ORTHO05D001017 3.8e-08 62.8 179 27.4
CiPaw.01G252300 Carya illinoinensis HOM05D001219 ORTHO05D001017 4.9e-08 62.4 109 34.9
Potri.003G179100 Populus trichocarpa HOM05D001219 ORTHO05D001017 4.9e-08 62.4 90 37.8
Medtr4g024200 Medicago truncatula HOM05D001219 ORTHO05D001017 6.4e-08 62.0 154 32.5
TPR.G9694 Trifolium pratense HOM05D001219 ORTHO05D001017 6.4e-08 62.0 120 32.5
TPR.G15128 Trifolium pratense HOM05D001219 ORTHO05D001017 1.9e-07 60.5 151 36.4
TPR.G38803 Trifolium pratense HOM05D001219 ORTHO05D001017 1.9e-07 60.5 170 29.4
Glyma.07G026100 Glycine max HOM05D001219 ORTHO05D001017 2.4e-07 60.1 168 27.4
Medtr6g042905 Medicago truncatula HOM05D001219 ORTHO05D001017 3.2e-07 59.7 124 29.8
Nitab4.5_0005934g0020 Nicotiana tabacum HOM05D001219 ORTHO05D001017 3.2e-07 59.7 114 31.6
TPR.G15685 Trifolium pratense HOM05D001219 ORTHO05D001017 4.2e-07 59.3 165 28.5
arahy.Tifrunner.gnm1.ann1.XM9YH2 Arachis hypogaea HOM05D001219 ORTHO05D001017 7.1e-07 58.5 191 28.8
Medtr6g022820 Medicago truncatula HOM05D001219 ORTHO05D001017 9.3e-07 58.2 123 30.1
Medtr3g081260 Medicago truncatula HOM05D001219 ORTHO05D001017 1.6e-06 57.4 169 27.8
Nitab4.5_0002046g0080 Nicotiana tabacum HOM05D001219 ORTHO05D001017 2.1e-06 57.0 108 32.4
DCAR_016289 Daucus carota HOM05D001219 ORTHO05D001017 2.7e-06 56.6 159 28.9
Medtr5g430490 Medicago truncatula HOM05D001219 ORTHO05D001017 4.6e-06 55.8 134 29.1
Rhsim06G0127500 Rhododendron simsii HOM05D001219 ORTHO05D001017 4.6e-06 55.8 168 28.0
ECA232G1154 Erigeron canadensis HOM05D001219 ORTHO05D001017 6.0e-06 55.5 159 31.4
Rhsim06G0127300 Rhododendron simsii HOM05D001219 ORTHO05D001017 6.0e-06 55.5 108 33.3
AUR62016288 Chenopodium quinoa HOM05D001219 ORTHO05D001017 7.9e-06 55.1 178 23.0
TAR636G1678 Trochodendron aralioides HOM05D001219 ORTHO05D001017 7.9e-06 55.1 168 29.8


User provided reference genes

Program Settings