Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0031600 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.5e-98 361.7 189 100.0
Rhsim01G0015200 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.5e-58 228.8 155 72.3
Rhsim01G0032900 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.7e-57 226.5 187 62.6
Rhsim01G0032600 Rhododendron simsii HOM05D001219 ORTHO05D001017 7.1e-51 204.5 155 65.2
Rhsim01G0029400 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.6e-50 203.4 154 65.6
Rhsim01G0032200 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.6e-45 186.0 156 60.3
Rhsim01G0031300 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.4e-45 185.7 155 58.7
Rhsim01G0030500 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.3e-44 183.7 155 60.0
Rhsim01G0030200 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.9e-44 182.6 157 58.6
Rhsim01G0031000 Rhododendron simsii HOM05D001219 ORTHO05D001017 6.4e-44 181.4 152 60.5
Rhsim01G0032000 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.1e-43 180.6 157 58.6
Rhsim01G0030800 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.4e-43 180.3 157 58.0
Rhsim01G0030000 Rhododendron simsii HOM05D001219 ORTHO05D001017 7.1e-43 177.9 156 59.0
Rhsim01G0029700 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.2e-43 177.6 157 68.8
Rhsim01G0030400 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.2e-42 177.2 152 58.6
Rhsim01G0030300 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.7e-42 176.0 155 57.4
Rhsim01G0030900 Rhododendron simsii HOM05D001219 ORTHO05D001017 4.6e-42 175.3 157 67.5
Rhsim01G0029800 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.0e-41 174.1 156 56.4
Rhsim01G0032100 Rhododendron simsii HOM05D001219 ORTHO05D001017 8.7e-41 171.0 157 66.9
Rhsim02G0048100 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.9e-40 169.9 109 77.1
Rhsim01G0029900 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.6e-40 167.5 153 56.2
Rhsim01G0030600 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.6e-40 167.5 135 63.7
Rhsim01G0029600 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.1e-39 166.4 152 58.6
Rhsim01G0029300 Rhododendron simsii HOM05D001219 ORTHO05D001017 8.1e-39 164.5 152 53.9
Rhsim01G0031200 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.2e-37 160.6 162 53.1
Rhsim04G0152300 Rhododendron simsii HOM05D001219 ORTHO05D001017 5.8e-37 158.3 166 51.8
Rhsim01G0032800 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.1e-26 123.2 153 45.8
Rhsim01G0030100 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.5e-24 116.3 98 61.2
Rhsim12G0117900 Rhododendron simsii HOM05D001219 ORTHO05D001017 5.6e-24 115.2 102 55.9
Rhsim01G0032400 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.6e-24 114.4 145 48.3
Rhsim01G0032300 Rhododendron simsii HOM05D001219 ORTHO05D001017 6.2e-23 111.7 98 60.2
Rhsim01G0082800 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.8e-22 110.2 102 53.9
Rhsim01G0030700 Rhododendron simsii HOM05D001219 ORTHO05D001017 5.8e-21 105.1 162 42.0
Rhsim05G0166000 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.9e-21 104.4 122 46.7
RhsimUnG0227200 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.8e-15 86.3 62 64.5
Rhsim01G0029500 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.4e-14 83.2 65 64.6
Rhsim01G0031800 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.9e-11 73.6 43 79.1
Hma1.2p1_0135F.1_g061780 Hydrangea macrophylla HOM05D001219 ORTHO05D001017 2.7e-10 69.7 163 30.1
CAN.G407.41 Capsicum annuum HOM05D001219 ORTHO05D001017 4.6e-10 68.9 159 28.3
AUR62013441 Chenopodium quinoa HOM05D001219 ORTHO05D001017 7.9e-10 68.2 163 30.1
Rhsim02G0048200 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.3e-09 67.4 49 67.3
Sc10g0006180 Simmondsia chinensis HOM05D001219 ORTHO05D001017 2.3e-09 66.6 152 28.3
Rhsim01G0031500 Rhododendron simsii HOM05D001219 ORTHO05D001017 5.1e-09 65.5 48 60.4
COL.COLO4_20760 Corchorus olitorius HOM05D001219 ORTHO05D001017 8.7e-09 64.7 167 29.9
COL.COLO4_31329 Corchorus olitorius HOM05D001219 ORTHO05D001017 8.7e-09 64.7 150 28.0
AUR62007700 Chenopodium quinoa HOM05D001219 ORTHO05D001017 5.7e-08 62.0 151 29.1
DCAR_016287 Daucus carota HOM05D001219 ORTHO05D001017 9.7e-08 61.2 155 29.0
Nitab4.5_0002046g0080 Nicotiana tabacum HOM05D001219 ORTHO05D001017 1.3e-07 60.8 164 26.8
Eucgr.E01273 Eucalyptus grandis HOM05D001219 ORTHO05D001017 2.2e-07 60.1 150 27.3
Nitab4.5_0005934g0020 Nicotiana tabacum HOM05D001219 ORTHO05D001017 3.7e-07 59.3 161 26.7
Prupe.3G095400 Prunus persica HOM05D001219 ORTHO05D001017 3.7e-07 59.3 152 27.0
COL.COLO4_08738 Corchorus olitorius HOM05D001219 ORTHO05D001017 8.2e-07 58.2 164 28.0
COL.COLO4_31198 Corchorus olitorius HOM05D001219 ORTHO05D001017 1.4e-06 57.4 162 27.2
arahy.Tifrunner.gnm1.ann1.JW8Z9M Arachis hypogaea HOM05D001219 ORTHO05D001017 4.1e-06 55.8 163 25.2
arahy.Tifrunner.gnm1.ann1.F6HDT7 Arachis hypogaea HOM05D001219 ORTHO05D001017 5.3e-06 55.5 163 25.2
Lsat_1_v5_gn_4_86000 Lactuca sativa HOM05D001219 ORTHO05D001017 6.9e-06 55.1 154 28.6


User provided reference genes

Program Settings