Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0021900 Rhododendron simsii HOM05D001390 ORTHO05D030884 6.1e-73 277.3 135 100.0
vmacro13048 Vaccinium macrocarpon HOM05D001390 ORTHO05D001522 1.3e-27 126.7 84 77.4
vmacro13071 Vaccinium macrocarpon HOM05D001390 ORTHO05D001522 1.3e-27 126.7 84 77.4
Rhsim01G0023400 Rhododendron simsii HOM05D001390 ORTHO05D001522 3.1e-24 115.5 66 87.9
Rhsim01G0022400 Rhododendron simsii HOM05D001390 ORTHO05D030884 2.7e-20 102.4 67 80.6
Actinidia28564 Actinidia chinensis HOM05D001390 ORTHO05D030884 1.3e-19 100.1 85 61.2
Actinidia29991 Actinidia chinensis HOM05D001390 ORTHO05D001522 6.7e-19 97.8 85 60.0
Lj9C722T0 Lonicera japonica HOM05D001390 ORTHO05D001522 1.7e-14 83.2 81 55.6
CSS0021466 Camellia sinensis var. sinensis HOM05D001390 ORTHO05D001522 4.9e-14 81.6 85 55.3
Haze_19119 Corylus avellana HOM05D001390 ORTHO05D001522 7.1e-13 77.8 82 53.7
Haze_19123 Corylus avellana HOM05D001390 ORTHO05D001522 7.1e-13 77.8 82 53.7
CiPaw.15G164000 Carya illinoinensis HOM05D001390 ORTHO05D001522 1.2e-12 77.0 85 52.9
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 1.6e-12 76.6 82 53.7
Atru.chr7.368 Acer truncatum HOM05D001390 ORTHO05D001522 3.5e-12 75.5 81 51.9
Dinv42815 Davidia involucrata HOM05D001390 ORTHO05D001522 6.0e-12 74.7 82 52.4
Dinv43285 Davidia involucrata HOM05D001390 ORTHO05D001522 6.0e-12 74.7 82 52.4
QL02p094245 Quercus lobata HOM05D001390 ORTHO05D001522 2.3e-11 72.8 82 52.4
Sabra18G0088100 Salix brachista HOM05D001390 ORTHO05D001522 6.7e-11 71.2 85 49.4
Actinidia20939 Actinidia chinensis HOM05D001390 ORTHO05D001522 8.7e-11 70.9 60 60.0
COL.COLO4_36574 Corchorus olitorius HOM05D001390 ORTHO05D001522 8.7e-11 70.9 81 50.6
Lalb_Chr08g0234321 Lupinus albus HOM05D001390 ORTHO05D001522 8.7e-11 70.9 85 49.4
Aqoxy7G02377 Aquilegia oxysepala HOM05D001390 ORTHO05D001522 1.5e-10 70.1 86 50.0
Gohir.A04G058100 Gossypium hirsutum HOM05D001390 ORTHO05D001522 1.5e-10 70.1 85 51.8
Gohir.D04G088100 Gossypium hirsutum HOM05D001390 ORTHO05D001522 1.9e-10 69.7 85 51.8
Gorai.012G098300 Gossypium raimondii HOM05D001390 ORTHO05D001522 2.5e-10 69.3 85 51.8
Potri.018G102500 Populus trichocarpa HOM05D001390 ORTHO05D001522 2.5e-10 69.3 85 50.6
TAR026G0002 Trochodendron aralioides HOM05D001390 ORTHO05D001522 3.3e-10 68.9 85 47.1
MD16G1258600 Malus domestica HOM05D001390 ORTHO05D001522 9.6e-10 67.4 85 49.4
ClCG06G012670 Citrullus lanatus HOM05D001390 ORTHO05D001522 1.3e-09 67.0 85 48.2
Ciclev10007232m.g Citrus clementina HOM05D001390 ORTHO05D001522 1.6e-09 66.6 80 52.5
MELO3C010197.2 Cucumis melo HOM05D001390 ORTHO05D001522 2.1e-09 66.2 85 49.4
Potri.006G180100 Populus trichocarpa HOM05D001390 ORTHO05D001522 2.1e-09 66.2 81 53.1
Sed0009348 Sechium edule HOM05D001390 ORTHO05D001522 2.1e-09 66.2 87 50.6
PGSC0003DMG400011213 Solanum tuberosum HOM05D001390 ORTHO05D001522 2.1e-09 66.2 81 44.4
Glyma.04G156200 Glycine max HOM05D001390 ORTHO05D001522 4.8e-09 65.1 87 44.8
Thecc.09G154400 Theobroma cacao HOM05D001390 ORTHO05D001522 4.8e-09 65.1 81 50.6
Sabra06G0137100 Salix brachista HOM05D001390 ORTHO05D001522 6.2e-09 64.7 81 51.9
GSVIVG01023694001 Vitis vinifera HOM05D001390 ORTHO05D013105 8.2e-09 64.3 89 46.1
Psat1g023440 Pisum sativum HOM05D001390 ORTHO05D001522 1.1e-08 63.9 81 46.9
CANSAT11G0702 Cannabis sativa HOM05D001390 ORTHO05D001522 1.4e-08 63.5 84 45.2
AUR62028376 Chenopodium quinoa HOM05D001390 ORTHO05D001522 1.4e-08 63.5 97 47.4
TPR.G9534 Trifolium pratense HOM05D001390 ORTHO05D001522 1.4e-08 63.5 85 44.7
Cpa.g.sc199.12 Carica papaya HOM05D001390 ORTHO05D001522 1.8e-08 63.2 85 48.2
AUR62025375 Chenopodium quinoa HOM05D001390 ORTHO05D001522 1.8e-08 63.2 94 44.7
Cc02_g28850 Coffea canephora HOM05D001390 ORTHO05D001522 1.8e-08 63.2 84 47.6
CsaV3_1G029220 Cucumis sativus L. HOM05D001390 ORTHO05D001522 3.1e-08 62.4 85 49.4
Duzib168G0337 Durio zibethinus HOM05D001390 ORTHO05D001522 3.1e-08 62.4 85 47.1
Glyma.06G223500 Glycine max HOM05D001390 ORTHO05D001522 3.1e-08 62.4 87 43.7
Cc06_g14470 Coffea canephora HOM05D001390 ORTHO05D001522 5.3e-08 61.6 81 43.2
MBI15_g26071_MAGBIO Magnolia biondii HOM05D001390 ORTHO05D001522 5.3e-08 61.6 86 45.3
SalBow6G5231 Salvia bowleyana HOM05D001390 ORTHO05D001522 5.3e-08 61.6 82 43.9
Ah.14g084360 Amaranthus hybridus HOM05D001390 ORTHO05D001522 6.9e-08 61.2 93 44.1
Lj6g0019418 Lotus japonicus HOM05D001390 ORTHO05D001522 6.9e-08 61.2 86 43.0
FAN21G2207 Fragaria x ananassa HOM05D001390 ORTHO05D001522 9.0e-08 60.8 82 47.6
Peaxi162Scf00038g00731 Petunia axillaris HOM05D001390 ORTHO05D001522 9.0e-08 60.8 81 43.2
Nitab4.5_0003759g0040 Nicotiana tabacum HOM05D001390 ORTHO05D001522 1.2e-07 60.5 81 43.2
CAN.G1190.19 Capsicum annuum HOM05D001390 ORTHO05D001522 1.5e-07 60.1 81 42.0
Prupe.1G101800 Prunus persica HOM05D001390 ORTHO05D001522 1.5e-07 60.1 83 45.8
Manes.06G032200 Manihot esculenta HOM05D001390 ORTHO05D001522 2.0e-07 59.7 81 46.9
Oeu010281.1 Olea europaea HOM05D001390 ORTHO05D001522 2.6e-07 59.3 71 45.1
Nitab4.5_0002809g0030 Nicotiana tabacum HOM05D001390 ORTHO05D001522 3.4e-07 58.9 81 42.0
FAN16G1655 Fragaria x ananassa HOM05D001390 ORTHO05D001522 4.5e-07 58.5 82 46.3
FAN25G2837 Fragaria x ananassa HOM05D001390 ORTHO05D001522 5.8e-07 58.2 82 46.3
MBI14_g16444_MAGBIO Magnolia biondii HOM05D001390 ORTHO05D001522 5.8e-07 58.2 85 47.1
FvH4_3g24640 Fragaria vesca HOM05D001390 ORTHO05D001522 7.6e-07 57.8 82 46.3
FAN11G3147 Fragaria x ananassa HOM05D001390 ORTHO05D001522 7.6e-07 57.8 82 46.3
RcHm_v2.0_Chr4g0405441 Rosa chinensis HOM05D001390 ORTHO05D001522 7.6e-07 57.8 85 47.1
DCAR_020092 Daucus carota HOM05D001390 ORTHO05D001522 1.0e-06 57.4 83 38.6
Solyc07g006030.4 Solanum lycopersicum HOM05D001390 ORTHO05D001522 1.3e-06 57.0 81 40.7
arahy.Tifrunner.gnm1.ann1.G68EH0 Arachis hypogaea HOM05D001390 ORTHO05D001522 2.2e-06 56.2 87 41.4
Phvul.009G195600 Phaseolus vulgaris HOM05D001390 ORTHO05D001522 2.2e-06 56.2 87 42.5
Sopen07g002170 Solanum pennellii HOM05D001390 ORTHO05D001522 2.2e-06 56.2 81 40.7
TWI63G0228 Tripterygium wilfordii HOM05D001390 ORTHO05D001522 6.5e-06 54.7 85 43.5
arahy.Tifrunner.gnm1.ann1.IQ8CLR Arachis hypogaea HOM05D001390 ORTHO05D001522 8.4e-06 54.3 87 41.4
Eucgr.C00239 Eucalyptus grandis HOM05D001390 ORTHO05D001522 8.4e-06 54.3 81 45.7
THA.LOC104811829 Tarenaya hassleriana HOM05D001390 ORTHO05D001522 8.4e-06 54.3 86 43.0


User provided reference genes

Program Settings