Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0018100 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.2e-122 442.2 209 100.0
Rhsim01G0017000 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.1e-96 354.4 217 81.1
Rhsim01G0016900 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.7e-19 99.8 70 70.0
Rhsim01G0018000 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.7e-18 94.7 70 68.6
Rhsim01G0013700 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.9e-17 93.6 172 36.0
Rhsim07G0025700 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.9e-17 93.6 116 40.5
Rhsim01G0013600 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.3e-17 92.8 171 33.9
Rhsim01G0013300 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.3e-16 90.9 171 34.5
Rhsim01G0013500 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.2e-16 88.6 171 33.3
Rhsim01G0013800 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.8e-15 87.0 74 56.8
Rhsim01G0013400 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.3e-15 85.5 216 30.6
Rhsim01G0014700 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.9e-15 85.1 172 31.4
Rhsim07G0210200 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.7e-13 80.5 74 55.4
Rhsim08G0168000 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.8e-13 79.3 71 57.7
Rhsim01G0014800 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.4e-12 77.4 175 30.9
Rhsim01G0018700 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.2e-11 74.3 73 50.7
CSS0031414 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 3.5e-11 72.8 127 33.1
Rhsim01G0014500 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.1e-11 72.0 108 38.0
Rhsim01G0017100 Rhododendron simsii HOM05D000664 ORTHO05D000491 7.9e-11 71.6 73 49.3
CSS0037447 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 1.0e-10 71.2 121 36.4
RhsimUnG0091800 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.3e-10 70.1 75 49.3
Rhsim11G0068300 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.0e-10 69.7 73 42.5
RhsimUnG0092200 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.0e-10 69.7 66 54.5
Rhsim11G0068400 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.9e-10 69.3 169 24.9
Rhsim01G0018400 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.1e-10 68.9 73 47.9
CSS0031662 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 8.7e-10 68.2 83 41.0
Rhsim04G0143000 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.7e-10 68.2 81 43.2
CSS0003240 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 1.1e-09 67.8 118 35.6
Rhsim11G0068600 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.3e-09 66.2 73 39.7
vmacro13067 Vaccinium macrocarpon HOM05D000664 ORTHO05D000491 3.3e-09 66.2 72 41.7
Rhsim01G0014900 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.7e-09 65.5 65 44.6
Rhsim01G0018500 Rhododendron simsii HOM05D002727 ORTHO05D002856 5.7e-09 65.5 72 47.2
RhsimUnG0091900 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.7e-09 65.5 71 43.7
vmacro19357 Vaccinium macrocarpon HOM05D000664 ORTHO05D000491 7.4e-09 65.1 53 54.7
Rhsim11G0068900 Rhododendron simsii HOM05D000664 ORTHO05D000491 9.7e-09 64.7 76 43.4
CSS0006010 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 1.3e-08 64.3 118 33.9
Rhsim04G0064500 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.6e-08 63.9 65 47.7
Rhsim11G0068800 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.8e-08 62.4 74 41.9
CSS0008769 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 8.2e-08 61.6 116 34.5
CSS0011530 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 8.2e-08 61.6 116 34.5
Rhsim11G0069100 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.2e-08 61.6 77 42.9
Rhsim01G0014200 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.1e-07 61.2 80 40.0
Nitab4.5_0000096g0170 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.8e-07 60.5 123 31.7
TAR626G1797 Trochodendron aralioides HOM05D000664 ORTHO05D000491 6.9e-07 58.5 86 39.5
MD16G1240100 Malus domestica HOM05D000664 ORTHO05D000491 1.2e-06 57.8 111 35.1
Rhsim03G0248800 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.2e-06 57.8 141 32.6
vmacro06138 Vaccinium macrocarpon HOM05D000664 ORTHO05D000491 1.2e-06 57.8 121 30.6
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 2.0e-06 57.0 81 40.7
Migut.F01252 Erythranthe guttata HOM05D000664 ORTHO05D000491 2.0e-06 57.0 78 37.2
Rhsim01G0014600 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.0e-06 57.0 76 42.1
Haze_19047 Corylus avellana HOM05D000664 ORTHO05D000491 2.6e-06 56.6 81 40.7
Lj2P385T13 Lonicera japonica HOM05D000664 ORTHO05D000491 3.4e-06 56.2 80 42.5
CiPaw.15G154900 Carya illinoinensis HOM05D000664 ORTHO05D000491 5.9e-06 55.5 82 39.0
COL.COLO4_37363 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.9e-06 55.5 76 39.5
Migut.F01253 Erythranthe guttata HOM05D000664 ORTHO05D000491 5.9e-06 55.5 78 35.9
Rhsim01G0014100 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.9e-06 55.5 76 40.8
Rhsim01G0016600 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.9e-06 55.5 70 38.6
RcHm_v2.0_Chr4g0398061 Rosa chinensis HOM05D000664 ORTHO05D000491 5.9e-06 55.5 109 36.7
CSS0035483 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 7.7e-06 55.1 77 41.6
Rhsim10G0184800 Rhododendron simsii HOM05D000664 ORTHO05D000491 7.7e-06 55.1 74 40.5


User provided reference genes

Program Settings