Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 7.2e-66 253.8 134 100.0
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 2.7e-57 225.3 134 90.3
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 8.3e-54 213.8 134 85.1
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 5.6e-42 174.5 133 71.4
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 2.6e-39 165.6 134 66.4
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 9.8e-39 163.7 137 68.6
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 8.3e-38 160.6 134 64.9
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.8e-37 159.5 134 64.2
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 1.8e-37 159.5 134 64.2
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.1e-37 158.3 134 64.2
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.0e-36 156.0 134 62.7
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 7.8e-36 154.1 129 69.0
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.3e-35 153.3 133 64.7
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.7e-35 152.9 129 68.2
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.7e-35 152.9 135 63.0
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 2.3e-35 152.5 135 60.7
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 7.3e-34 147.5 133 58.6
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.5e-34 147.1 137 61.3
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 9.5e-34 147.1 137 61.3
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.6e-33 146.4 135 59.3
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.6e-33 146.4 135 57.8
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 3.6e-33 145.2 132 59.8
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 3.6e-33 145.2 129 62.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 8.0e-33 144.1 133 59.4
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.0e-32 143.7 110 69.1
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 1.4e-32 143.3 132 59.8
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.8e-32 142.9 130 58.5
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 3.1e-32 142.1 136 58.8
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.1e-32 142.1 130 56.9
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 5.2e-32 141.4 130 58.5
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 6.8e-32 141.0 131 59.5
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 8.9e-32 140.6 135 57.8
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 8.9e-32 140.6 98 70.4
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 1.2e-31 140.2 131 58.8
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.2e-31 140.2 141 58.2
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 2.0e-31 139.4 135 60.7
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 2.0e-31 139.4 128 58.6
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 2.6e-31 139.0 131 58.8
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.6e-31 139.0 137 58.4
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 2.6e-31 139.0 134 57.5
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 3.4e-31 138.7 130 56.9
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 3.4e-31 138.7 127 58.3
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 4.4e-31 138.3 112 66.1
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 4.4e-31 138.3 109 64.2
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 7.5e-31 137.5 132 56.8
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 9.8e-31 137.1 134 58.2
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 9.8e-31 137.1 132 56.1
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.3e-30 136.7 134 58.2
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 2.9e-30 135.6 134 59.0
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 3.7e-30 135.2 130 55.4
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 4.9e-30 134.8 132 59.1
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 4.9e-30 134.8 126 60.3
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.9e-30 134.8 141 56.0
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 6.4e-30 134.4 133 55.6
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 6.4e-30 134.4 133 55.6
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 6.4e-30 134.4 133 55.6
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.4e-30 134.4 131 57.3
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.9e-29 132.9 133 55.6
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.9e-29 132.9 133 55.6
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.9e-29 132.9 129 56.6
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 1.9e-29 132.9 131 55.7
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.9e-29 132.9 126 60.3
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 4.1e-29 131.7 129 56.6
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 4.1e-29 131.7 135 54.1
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 4.1e-29 131.7 126 54.8
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 4.1e-29 131.7 109 63.3
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 5.4e-29 131.3 128 55.5
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 7.0e-29 131.0 129 55.8
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 7.0e-29 131.0 128 55.5
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 7.0e-29 131.0 134 53.7
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 7.0e-29 131.0 130 53.1
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 9.2e-29 130.6 133 54.9
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 1.2e-28 130.2 103 64.1
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.6e-28 129.8 128 54.7
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 2.0e-28 129.4 123 56.1
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-28 129.0 128 53.9
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-28 129.0 128 53.9
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 3.5e-28 128.6 137 51.8
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 6.0e-28 127.9 129 55.0
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 6.0e-28 127.9 134 56.7
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.7e-27 126.3 119 61.3
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 3.0e-27 125.6 130 54.6
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 3.0e-27 125.6 130 54.6
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.0e-27 124.8 105 63.8
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 5.0e-27 124.8 107 59.8
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 6.6e-27 124.4 125 54.4
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 6.6e-27 124.4 129 52.7
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.5e-26 123.2 129 52.7
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.5e-26 123.2 101 62.4
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-26 122.9 93 64.5
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 3.3e-26 122.1 89 68.5
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 3.3e-26 122.1 110 58.2
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 5.6e-26 121.3 120 53.3
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.1e-25 119.4 134 50.7
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.6e-25 118.6 129 51.2
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 3.6e-25 118.6 130 52.3
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 4.7e-25 118.2 121 57.0
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 6.2e-25 117.9 130 52.3
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.8e-24 116.3 141 52.5
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.8e-24 116.3 121 57.0
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 4.0e-24 115.2 128 54.7
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 4.0e-24 115.2 121 57.9
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 4.0e-24 115.2 106 57.5
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 8.9e-24 114.0 134 48.5
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.2e-23 113.6 89 74.2
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.5e-23 113.2 132 52.3
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 3.4e-23 112.1 131 48.9
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.9e-22 108.2 105 53.3
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.2e-20 103.6 129 45.0
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 6.0e-20 101.3 100 55.0
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.3e-19 100.1 73 67.1
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 3.0e-19 99.0 91 56.0
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 5.6e-18 94.7 105 50.5
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 7.3e-18 94.4 106 53.8
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.6e-17 93.2 100 50.0
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.4e-16 90.1 70 67.1
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 4.0e-16 88.6 95 48.4
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.0e-15 86.3 70 67.1
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.9e-13 79.7 88 46.6
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 9.2e-13 77.4 89 44.9
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 2.7e-12 75.9 85 47.1
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 6.0e-12 74.7 94 45.7
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 8.1e-09 64.3 126 31.7
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 4.0e-08 62.0 84 38.1
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 5.2e-08 61.6 99 35.4
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 9.9e-07 57.4 41 56.1
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 9.9e-07 57.4 41 56.1


User provided reference genes

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